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Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays
Quantitative imaging methods to analyze cell migration assays are not standardized. Here we present a suite of two-dimensional barrier assays describing the collective spreading of an initially-confined population of 3T3 fibroblast cells. To quantify the motility rate we apply two different automati...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3691172/ https://www.ncbi.nlm.nih.gov/pubmed/23826283 http://dx.doi.org/10.1371/journal.pone.0067389 |
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author | Treloar, Katrina K. Simpson, Matthew J. |
author_facet | Treloar, Katrina K. Simpson, Matthew J. |
author_sort | Treloar, Katrina K. |
collection | PubMed |
description | Quantitative imaging methods to analyze cell migration assays are not standardized. Here we present a suite of two-dimensional barrier assays describing the collective spreading of an initially-confined population of 3T3 fibroblast cells. To quantify the motility rate we apply two different automatic image detection methods to locate the position of the leading edge of the spreading population after [Image: see text], [Image: see text] and [Image: see text] hours. These results are compared with a manual edge detection method where we systematically vary the detection threshold. Our results indicate that the observed spreading rates are very sensitive to the choice of image analysis tools and we show that a standard measure of cell migration can vary by as much as 25% for the same experimental images depending on the details of the image analysis tools. Our results imply that it is very difficult, if not impossible, to meaningfully compare previously published measures of cell migration since previous results have been obtained using different image analysis techniques and the details of these techniques are not always reported. Using a mathematical model, we provide a physical interpretation of our edge detection results. The physical interpretation is important since edge detection algorithms alone do not specify any physical measure, or physical definition, of the leading edge of the spreading population. Our modeling indicates that variations in the image threshold parameter correspond to a consistent variation in the local cell density. This means that varying the threshold parameter is equivalent to varying the location of the leading edge in the range of approximately 1–5% of the maximum cell density. |
format | Online Article Text |
id | pubmed-3691172 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-36911722013-07-03 Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays Treloar, Katrina K. Simpson, Matthew J. PLoS One Research Article Quantitative imaging methods to analyze cell migration assays are not standardized. Here we present a suite of two-dimensional barrier assays describing the collective spreading of an initially-confined population of 3T3 fibroblast cells. To quantify the motility rate we apply two different automatic image detection methods to locate the position of the leading edge of the spreading population after [Image: see text], [Image: see text] and [Image: see text] hours. These results are compared with a manual edge detection method where we systematically vary the detection threshold. Our results indicate that the observed spreading rates are very sensitive to the choice of image analysis tools and we show that a standard measure of cell migration can vary by as much as 25% for the same experimental images depending on the details of the image analysis tools. Our results imply that it is very difficult, if not impossible, to meaningfully compare previously published measures of cell migration since previous results have been obtained using different image analysis techniques and the details of these techniques are not always reported. Using a mathematical model, we provide a physical interpretation of our edge detection results. The physical interpretation is important since edge detection algorithms alone do not specify any physical measure, or physical definition, of the leading edge of the spreading population. Our modeling indicates that variations in the image threshold parameter correspond to a consistent variation in the local cell density. This means that varying the threshold parameter is equivalent to varying the location of the leading edge in the range of approximately 1–5% of the maximum cell density. Public Library of Science 2013-06-24 /pmc/articles/PMC3691172/ /pubmed/23826283 http://dx.doi.org/10.1371/journal.pone.0067389 Text en © 2013 Treloar, Simpson http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Treloar, Katrina K. Simpson, Matthew J. Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays |
title | Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays |
title_full | Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays |
title_fullStr | Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays |
title_full_unstemmed | Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays |
title_short | Sensitivity of Edge Detection Methods for Quantifying Cell Migration Assays |
title_sort | sensitivity of edge detection methods for quantifying cell migration assays |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3691172/ https://www.ncbi.nlm.nih.gov/pubmed/23826283 http://dx.doi.org/10.1371/journal.pone.0067389 |
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