Cargando…

Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)

The sulfur isotope effect produced by sulfate reducing microbes is commonly used to trace biogeochemical cycles of sulfur and carbon in aquatic and sedimentary environments. To test the contribution of intracellular coupling between carbon and sulfur metabolisms to the overall magnitude of the sulfu...

Descripción completa

Detalles Bibliográficos
Autores principales: Sim, Min Sub, Wang, David T., Zane, Grant M., Wall, Judy D., Bosak, Tanja, Ono, Shuhei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3691511/
https://www.ncbi.nlm.nih.gov/pubmed/23805134
http://dx.doi.org/10.3389/fmicb.2013.00171
_version_ 1782274478617657344
author Sim, Min Sub
Wang, David T.
Zane, Grant M.
Wall, Judy D.
Bosak, Tanja
Ono, Shuhei
author_facet Sim, Min Sub
Wang, David T.
Zane, Grant M.
Wall, Judy D.
Bosak, Tanja
Ono, Shuhei
author_sort Sim, Min Sub
collection PubMed
description The sulfur isotope effect produced by sulfate reducing microbes is commonly used to trace biogeochemical cycles of sulfur and carbon in aquatic and sedimentary environments. To test the contribution of intracellular coupling between carbon and sulfur metabolisms to the overall magnitude of the sulfur isotope effect, this study compared sulfur isotope fractionations by mutants of Desulfovibrio vulgaris Hildenborough. We tested mutant strains lacking one or two periplasmic (Hyd, Hyn-1, Hyn-2, and Hys) or cytoplasmic hydrogenases (Ech and CooL), and a mutant lacking type I tetraheme cytochrome (TpI-c(3)). In batch culture, wild-type D. vulgaris and its hydrogenase mutants had comparable growth kinetics and produced the same sulfur isotope effects. This is consistent with the reported redundancy of hydrogenases in D. vulgaris. However, the TpI-c(3) mutant (ΔcycA) exhibited slower growth and sulfate reduction rates in batch culture, and produced more H(2) and an approximately 50% larger sulfur isotope effect, compared to the wild type. The magnitude of sulfur isotope fractionation in the CycA deletion strain, thus, increased due to the disrupted coupling of the carbon oxidation and sulfate reduction pathways. In continuous culture, wild-type D. vulgaris and the CycA mutant produced similar sulfur isotope effects, underscoring the influence of environmental conditions on the relative contribution of hydrogen cycling to the electron transport. The large sulfur isotope effects associated with the non-ideal stoichiometry of sulfate reduction in this study imply that simultaneous fermentation and sulfate reduction may be responsible for some of the large naturally-occurring sulfur isotope effects. Overall, mutant strains provide a powerful tool to test the effect of specific redox proteins and pathways on sulfur isotope fractionation.
format Online
Article
Text
id pubmed-3691511
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-36915112013-06-26 Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3) Sim, Min Sub Wang, David T. Zane, Grant M. Wall, Judy D. Bosak, Tanja Ono, Shuhei Front Microbiol Microbiology The sulfur isotope effect produced by sulfate reducing microbes is commonly used to trace biogeochemical cycles of sulfur and carbon in aquatic and sedimentary environments. To test the contribution of intracellular coupling between carbon and sulfur metabolisms to the overall magnitude of the sulfur isotope effect, this study compared sulfur isotope fractionations by mutants of Desulfovibrio vulgaris Hildenborough. We tested mutant strains lacking one or two periplasmic (Hyd, Hyn-1, Hyn-2, and Hys) or cytoplasmic hydrogenases (Ech and CooL), and a mutant lacking type I tetraheme cytochrome (TpI-c(3)). In batch culture, wild-type D. vulgaris and its hydrogenase mutants had comparable growth kinetics and produced the same sulfur isotope effects. This is consistent with the reported redundancy of hydrogenases in D. vulgaris. However, the TpI-c(3) mutant (ΔcycA) exhibited slower growth and sulfate reduction rates in batch culture, and produced more H(2) and an approximately 50% larger sulfur isotope effect, compared to the wild type. The magnitude of sulfur isotope fractionation in the CycA deletion strain, thus, increased due to the disrupted coupling of the carbon oxidation and sulfate reduction pathways. In continuous culture, wild-type D. vulgaris and the CycA mutant produced similar sulfur isotope effects, underscoring the influence of environmental conditions on the relative contribution of hydrogen cycling to the electron transport. The large sulfur isotope effects associated with the non-ideal stoichiometry of sulfate reduction in this study imply that simultaneous fermentation and sulfate reduction may be responsible for some of the large naturally-occurring sulfur isotope effects. Overall, mutant strains provide a powerful tool to test the effect of specific redox proteins and pathways on sulfur isotope fractionation. Frontiers Media S.A. 2013-06-25 /pmc/articles/PMC3691511/ /pubmed/23805134 http://dx.doi.org/10.3389/fmicb.2013.00171 Text en Copyright © 2013 Sim, Wang, Zane, Wall, Bosak and Ono. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.
spellingShingle Microbiology
Sim, Min Sub
Wang, David T.
Zane, Grant M.
Wall, Judy D.
Bosak, Tanja
Ono, Shuhei
Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)
title Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)
title_full Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)
title_fullStr Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)
title_full_unstemmed Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)
title_short Fractionation of sulfur isotopes by Desulfovibrio vulgaris mutants lacking hydrogenases or type I tetraheme cytochrome c(3)
title_sort fractionation of sulfur isotopes by desulfovibrio vulgaris mutants lacking hydrogenases or type i tetraheme cytochrome c(3)
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3691511/
https://www.ncbi.nlm.nih.gov/pubmed/23805134
http://dx.doi.org/10.3389/fmicb.2013.00171
work_keys_str_mv AT simminsub fractionationofsulfurisotopesbydesulfovibriovulgarismutantslackinghydrogenasesortypeitetrahemecytochromec3
AT wangdavidt fractionationofsulfurisotopesbydesulfovibriovulgarismutantslackinghydrogenasesortypeitetrahemecytochromec3
AT zanegrantm fractionationofsulfurisotopesbydesulfovibriovulgarismutantslackinghydrogenasesortypeitetrahemecytochromec3
AT walljudyd fractionationofsulfurisotopesbydesulfovibriovulgarismutantslackinghydrogenasesortypeitetrahemecytochromec3
AT bosaktanja fractionationofsulfurisotopesbydesulfovibriovulgarismutantslackinghydrogenasesortypeitetrahemecytochromec3
AT onoshuhei fractionationofsulfurisotopesbydesulfovibriovulgarismutantslackinghydrogenasesortypeitetrahemecytochromec3