The ModFOLD4 server for the quality assessment of 3D protein models

Once you have generated a 3D model of a protein, how do you know whether it bears any resemblance to the actual structure? To determine the usefulness of 3D models of proteins, they must be assessed in terms of their quality by methods that predict their similarity to the native structure. The ModFO...

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Detalles Bibliográficos
Autores principales: McGuffin, Liam J., Buenavista, Maria T., Roche, Daniel B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3692122/
https://www.ncbi.nlm.nih.gov/pubmed/23620298
http://dx.doi.org/10.1093/nar/gkt294
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author McGuffin, Liam J.
Buenavista, Maria T.
Roche, Daniel B.
author_facet McGuffin, Liam J.
Buenavista, Maria T.
Roche, Daniel B.
author_sort McGuffin, Liam J.
collection PubMed
description Once you have generated a 3D model of a protein, how do you know whether it bears any resemblance to the actual structure? To determine the usefulness of 3D models of proteins, they must be assessed in terms of their quality by methods that predict their similarity to the native structure. The ModFOLD4 server is the latest version of our leading independent server for the estimation of both the global and local (per-residue) quality of 3D protein models. The server produces both machine readable and graphical output, providing users with intuitive visual reports on the quality of predicted protein tertiary structures. The ModFOLD4 server is freely available to all at: http://www.reading.ac.uk/bioinf/ModFOLD/.
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spelling pubmed-36921222013-06-25 The ModFOLD4 server for the quality assessment of 3D protein models McGuffin, Liam J. Buenavista, Maria T. Roche, Daniel B. Nucleic Acids Res Articles Once you have generated a 3D model of a protein, how do you know whether it bears any resemblance to the actual structure? To determine the usefulness of 3D models of proteins, they must be assessed in terms of their quality by methods that predict their similarity to the native structure. The ModFOLD4 server is the latest version of our leading independent server for the estimation of both the global and local (per-residue) quality of 3D protein models. The server produces both machine readable and graphical output, providing users with intuitive visual reports on the quality of predicted protein tertiary structures. The ModFOLD4 server is freely available to all at: http://www.reading.ac.uk/bioinf/ModFOLD/. Oxford University Press 2013-07 2013-04-25 /pmc/articles/PMC3692122/ /pubmed/23620298 http://dx.doi.org/10.1093/nar/gkt294 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
McGuffin, Liam J.
Buenavista, Maria T.
Roche, Daniel B.
The ModFOLD4 server for the quality assessment of 3D protein models
title The ModFOLD4 server for the quality assessment of 3D protein models
title_full The ModFOLD4 server for the quality assessment of 3D protein models
title_fullStr The ModFOLD4 server for the quality assessment of 3D protein models
title_full_unstemmed The ModFOLD4 server for the quality assessment of 3D protein models
title_short The ModFOLD4 server for the quality assessment of 3D protein models
title_sort modfold4 server for the quality assessment of 3d protein models
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3692122/
https://www.ncbi.nlm.nih.gov/pubmed/23620298
http://dx.doi.org/10.1093/nar/gkt294
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