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A Simulation Optimization Approach to Epidemic Forecasting

Reliable forecasts of influenza can aid in the control of both seasonal and pandemic outbreaks. We introduce a simulation optimization (SIMOP) approach for forecasting the influenza epidemic curve. This study represents the final step of a project aimed at using a combination of simulation, classifi...

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Autores principales: Nsoesie, Elaine O., Beckman, Richard J., Shashaani, Sara, Nagaraj, Kalyani S., Marathe, Madhav V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694918/
https://www.ncbi.nlm.nih.gov/pubmed/23826222
http://dx.doi.org/10.1371/journal.pone.0067164
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author Nsoesie, Elaine O.
Beckman, Richard J.
Shashaani, Sara
Nagaraj, Kalyani S.
Marathe, Madhav V.
author_facet Nsoesie, Elaine O.
Beckman, Richard J.
Shashaani, Sara
Nagaraj, Kalyani S.
Marathe, Madhav V.
author_sort Nsoesie, Elaine O.
collection PubMed
description Reliable forecasts of influenza can aid in the control of both seasonal and pandemic outbreaks. We introduce a simulation optimization (SIMOP) approach for forecasting the influenza epidemic curve. This study represents the final step of a project aimed at using a combination of simulation, classification, statistical and optimization techniques to forecast the epidemic curve and infer underlying model parameters during an influenza outbreak. The SIMOP procedure combines an individual-based model and the Nelder-Mead simplex optimization method. The method is used to forecast epidemics simulated over synthetic social networks representing Montgomery County in Virginia, Miami, Seattle and surrounding metropolitan regions. The results are presented for the first four weeks. Depending on the synthetic network, the peak time could be predicted within a 95% CI as early as seven weeks before the actual peak. The peak infected and total infected were also accurately forecasted for Montgomery County in Virginia within the forecasting period. Forecasting of the epidemic curve for both seasonal and pandemic influenza outbreaks is a complex problem, however this is a preliminary step and the results suggest that more can be achieved in this area.
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spelling pubmed-36949182013-07-03 A Simulation Optimization Approach to Epidemic Forecasting Nsoesie, Elaine O. Beckman, Richard J. Shashaani, Sara Nagaraj, Kalyani S. Marathe, Madhav V. PLoS One Research Article Reliable forecasts of influenza can aid in the control of both seasonal and pandemic outbreaks. We introduce a simulation optimization (SIMOP) approach for forecasting the influenza epidemic curve. This study represents the final step of a project aimed at using a combination of simulation, classification, statistical and optimization techniques to forecast the epidemic curve and infer underlying model parameters during an influenza outbreak. The SIMOP procedure combines an individual-based model and the Nelder-Mead simplex optimization method. The method is used to forecast epidemics simulated over synthetic social networks representing Montgomery County in Virginia, Miami, Seattle and surrounding metropolitan regions. The results are presented for the first four weeks. Depending on the synthetic network, the peak time could be predicted within a 95% CI as early as seven weeks before the actual peak. The peak infected and total infected were also accurately forecasted for Montgomery County in Virginia within the forecasting period. Forecasting of the epidemic curve for both seasonal and pandemic influenza outbreaks is a complex problem, however this is a preliminary step and the results suggest that more can be achieved in this area. Public Library of Science 2013-06-27 /pmc/articles/PMC3694918/ /pubmed/23826222 http://dx.doi.org/10.1371/journal.pone.0067164 Text en © 2013 Nsoesie et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Nsoesie, Elaine O.
Beckman, Richard J.
Shashaani, Sara
Nagaraj, Kalyani S.
Marathe, Madhav V.
A Simulation Optimization Approach to Epidemic Forecasting
title A Simulation Optimization Approach to Epidemic Forecasting
title_full A Simulation Optimization Approach to Epidemic Forecasting
title_fullStr A Simulation Optimization Approach to Epidemic Forecasting
title_full_unstemmed A Simulation Optimization Approach to Epidemic Forecasting
title_short A Simulation Optimization Approach to Epidemic Forecasting
title_sort simulation optimization approach to epidemic forecasting
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694918/
https://www.ncbi.nlm.nih.gov/pubmed/23826222
http://dx.doi.org/10.1371/journal.pone.0067164
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