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Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil

The taxonomic position of three acidophilic actinobacteria, strains FGG38, FGG39 and FSCA67(T), isolated from the fermentation litter layer of a spruce forest soil was established using a polyphasic approach. The strains were shown to have chemotaxonomic and morphological properties consistent with...

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Autores principales: Golinska, Patrycja, Ahmed, Lina, Wang, Dylan, Goodfellow, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3695678/
https://www.ncbi.nlm.nih.gov/pubmed/23716127
http://dx.doi.org/10.1007/s10482-013-9938-9
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author Golinska, Patrycja
Ahmed, Lina
Wang, Dylan
Goodfellow, Michael
author_facet Golinska, Patrycja
Ahmed, Lina
Wang, Dylan
Goodfellow, Michael
author_sort Golinska, Patrycja
collection PubMed
description The taxonomic position of three acidophilic actinobacteria, strains FGG38, FGG39 and FSCA67(T), isolated from the fermentation litter layer of a spruce forest soil was established using a polyphasic approach. The strains were shown to have chemotaxonomic and morphological properties consistent with their classification in the genus Streptacidiphilus and formed a distinct phyletic line in the Streptacidiphilus 16S rRNA gene tree being most closely related to Streptacidiphilus albus DSM 41753(T) (99.4 % similarity). DNA:DNA relatedness data showed that isolate FSCA67(T) and the type strain of S. albus belonged to markedly distinct genomic species. The isolates had many phenotypic properties in common and were distinguished readily from their closest phylogenetic neighbours in the Streptacidiphilus gene tree using a broad range of these features. Based on the combined genotypic and phenotypic data the three isolates are considered to represent a new Streptacidiphilus species. The name Streptacidiphilus durhamensis sp. nov. is proposed for this taxon with isolate FSCA67(T) (=DSM 45796(T) = KACC 17154(T) = NCIMB 14829(T)) as the type strain.
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spelling pubmed-36956782013-07-18 Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil Golinska, Patrycja Ahmed, Lina Wang, Dylan Goodfellow, Michael Antonie Van Leeuwenhoek Original Paper The taxonomic position of three acidophilic actinobacteria, strains FGG38, FGG39 and FSCA67(T), isolated from the fermentation litter layer of a spruce forest soil was established using a polyphasic approach. The strains were shown to have chemotaxonomic and morphological properties consistent with their classification in the genus Streptacidiphilus and formed a distinct phyletic line in the Streptacidiphilus 16S rRNA gene tree being most closely related to Streptacidiphilus albus DSM 41753(T) (99.4 % similarity). DNA:DNA relatedness data showed that isolate FSCA67(T) and the type strain of S. albus belonged to markedly distinct genomic species. The isolates had many phenotypic properties in common and were distinguished readily from their closest phylogenetic neighbours in the Streptacidiphilus gene tree using a broad range of these features. Based on the combined genotypic and phenotypic data the three isolates are considered to represent a new Streptacidiphilus species. The name Streptacidiphilus durhamensis sp. nov. is proposed for this taxon with isolate FSCA67(T) (=DSM 45796(T) = KACC 17154(T) = NCIMB 14829(T)) as the type strain. Springer Netherlands 2013-05-30 2013 /pmc/articles/PMC3695678/ /pubmed/23716127 http://dx.doi.org/10.1007/s10482-013-9938-9 Text en © The Author(s) 2013 https://creativecommons.org/licenses/by/2.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.
spellingShingle Original Paper
Golinska, Patrycja
Ahmed, Lina
Wang, Dylan
Goodfellow, Michael
Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
title Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
title_full Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
title_fullStr Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
title_full_unstemmed Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
title_short Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
title_sort streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3695678/
https://www.ncbi.nlm.nih.gov/pubmed/23716127
http://dx.doi.org/10.1007/s10482-013-9938-9
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