Cargando…

DNA Methylation Regulated Nucleosome Dynamics

A strong correlation between nucleosome positioning and DNA methylation patterns has been reported in literature. However, the mechanistic model accounting for the correlation remains elusive. In this study, we evaluated the effects of specific DNA methylation patterns on modulating nucleosome confo...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jimenez-Useche, Isabel, Ke, Jiaying, Tian, Yuqing, Shim, Daphne, Howell, Steven C., Qiu, Xiangyun, Yuan, Chongli
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2013
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3698496/ https://www.ncbi.nlm.nih.gov/pubmed/23817195 http://dx.doi.org/10.1038/srep02121

Ejemplares similares

Solution Scattering and FRET Studies on Nucleosomes Reveal DNA Unwrapping Effects of H3 and H4 Tail Removal
por: Andresen, Kurt, et al.
Publicado: (2013)

NUCLEOSOME DYNAMICS REGULATE DNA PROCESSING
por: Adkins, Nicholas L., et al.
Publicado: (2013)

Characterization of Dnmt1 Binding and DNA Methylation on Nucleosomes and Nucleosomal Arrays
por: Schrader, Anna, et al.
Publicado: (2015)

Effects of DNA methylation on nucleosome stability
por: Collings, Clayton K., et al.
Publicado: (2013)

Differential dynamics specify MeCP2 function at methylated DNA and nucleosomes
por: Chua, Gabriella N. L., et al.
Publicado: (2023)

Nucleosomes protect DNA from DNA methylation in vivo and in vitro
por: Felle, Max, et al.
Publicado: (2011)

Nucleosome deposition and DNA methylation at coding region boundaries
por: Choi, Jung Kyoon, et al.
Publicado: (2009)

Genome wide analysis of DNA methylation and nucleosome positioning
por: Jones, Peter A
Publicado: (2013)

Exploring the Link between Nucleosome Occupancy and DNA Methylation
por: Lövkvist, Cecilia, et al.
Publicado: (2018)

Chromatin and nucleosome dynamics in DNA damage and repair
por: Hauer, Michael H., et al.
Publicado: (2017)

Influence of DNA methylation on positioning and DNA flexibility of nucleosomes with pericentric satellite DNA
por: Osakabe, Akihisa, et al.
Publicado: (2015)

Links between DNA methylation and nucleosome occupancy in the human genome
por: Collings, Clayton K., et al.
Publicado: (2017)

Nucleosome–nucleosome interactions via histone tails and linker DNA regulate nuclear rigidity
por: Shimamoto, Yuta, et al.
Publicado: (2017)

Histone dynamics mediate DNA unwrapping and sliding in nucleosomes
por: Armeev, Grigoriy A., et al.
Publicado: (2021)

Dynamic regulation of transcription factors by nucleosome remodeling
por: Li, Ming, et al.
Publicado: (2015)

Nucleosomal DNA binding drives the recognition of H3K36-methylated nucleosomes by the PSIP1-PWWP domain
por: van Nuland, Rick, et al.
Publicado: (2013)

Nucleosome Dynamics: a new tool for the dynamic analysis of nucleosome positioning
por: Buitrago, Diana, et al.
Publicado: (2019)

Correlations between DNA methylation levels and nucleosome enrichment in the human genome
por: Collings, Clayton K, et al.
Publicado: (2013)

DDM1 and Lsh remodelers allow methylation of DNA wrapped in nucleosomes
por: Lyons, David B, et al.
Publicado: (2017)

NOMePlot: analysis of DNA methylation and nucleosome occupancy at the single molecule
por: Requena, Francisco, et al.
Publicado: (2019)

Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules
por: Kelly, Theresa K., et al.
Publicado: (2012)

Regulation of the nucleosome unwrapping rate controls DNA accessibility
por: North, Justin A., et al.
Publicado: (2012)

Nucleosome dynamics during chromatin remodeling in vivo
por: Ramachandran, Srinivas, et al.
Publicado: (2016)

Simultaneous measurement of chromatin accessibility, DNA methylation, and nucleosome phasing in single cells
por: Pott, Sebastian
Publicado: (2017)

Trajectories of microsecond molecular dynamics simulations of nucleosomes and nucleosome core particles
por: Shaytan, Alexey K., et al.
Publicado: (2016)

On the role of inter-nucleosomal interactions and intrinsic nucleosome dynamics in chromatin function
por: Krajewski, Wladyslaw A.
Publicado: (2016)

High resolution dynamic mapping of histone-DNA interactions in a nucleosome
por: Hall, Michael A., et al.
Publicado: (2009)

Nucleosomal DNA Dynamics Mediate Oct4 Pioneer Factor Binding
por: Huertas, Jan, et al.
Publicado: (2020)

N(6)-methyldeoxyadenosine directs nucleosome positioning in Tetrahymena DNA
por: Luo, Guan-Zheng, et al.
Publicado: (2018)

Histone modifications regulate DNA replication coupled nucleosome assembly
por: Han, Junhong, et al.
Publicado: (2013)

Regulation of chromatin folding by conformational variations of nucleosome linker DNA
por: Buckwalter, Jenna M., et al.
Publicado: (2017)

Structure and dynamics of DNA loops on nucleosomes studied with atomistic, microsecond-scale molecular dynamics
por: Pasi, Marco, et al.
Publicado: (2016)

Simultaneous Discovery of Cell-Free DNA and the Nucleosome Ladder
por: Henikoff, Steven, et al.
Publicado: (2018)

Promoter nucleosome dynamics regulated by signalling through the CTD code
por: Materne, Philippe, et al.
Publicado: (2015)

Lysine succinylation on non-histone chromosomal protein HMG-17 (HMGN2) regulates nucleosomal DNA accessibility by disrupting the HMGN2–nucleosome association
por: Jing, Yihang, et al.
Publicado: (2021)

Understanding the Connection between Epigenetic DNA Methylation and Nucleosome Positioning from Computer Simulations
por: Portella, Guillem, et al.
Publicado: (2013)

Genome-wide nucleosome occupancy and DNA methylation profiling of four human cell lines
por: Statham, Aaron L., et al.
Publicado: (2014)

Stochastic Variation in DNA Methylation Modulates Nucleosome Occupancy and Alternative Splicing in Arabidopsis thaliana
por: Jabre, Ibtissam, et al.
Publicado: (2022)

Two Arginine Residues Suppress the Flexibility of Nucleosomal DNA in the Canonical Nucleosome Core
por: Kono, Hidetoshi, et al.
Publicado: (2015)

Histone Modifications, Internucleosome Dynamics, and DNA Stresses: How They Cooperate to “Functionalize” Nucleosomes
por: Krajewski, Wladyslaw A.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_iho9cffo7j9qs128m3cacc2nmq