A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation

Rabbit brain has been used in several works for the analysis of neurodevelopment. However, there are not specific digital rabbit brain atlases that allow an automatic identification of brain regions, which is a crucial step for various neuroimage analyses, and, instead, manual delineation of areas o...

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Autores principales: Muñoz-Moreno, Emma, Arbat-Plana, Ariadna, Batalle, Dafnis, Soria, Guadalupe, Illa, Miriam, Prats-Galino, Alberto, Eixarch, Elisenda, Gratacos, Eduard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3699590/
https://www.ncbi.nlm.nih.gov/pubmed/23844007
http://dx.doi.org/10.1371/journal.pone.0067418
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author Muñoz-Moreno, Emma
Arbat-Plana, Ariadna
Batalle, Dafnis
Soria, Guadalupe
Illa, Miriam
Prats-Galino, Alberto
Eixarch, Elisenda
Gratacos, Eduard
author_facet Muñoz-Moreno, Emma
Arbat-Plana, Ariadna
Batalle, Dafnis
Soria, Guadalupe
Illa, Miriam
Prats-Galino, Alberto
Eixarch, Elisenda
Gratacos, Eduard
author_sort Muñoz-Moreno, Emma
collection PubMed
description Rabbit brain has been used in several works for the analysis of neurodevelopment. However, there are not specific digital rabbit brain atlases that allow an automatic identification of brain regions, which is a crucial step for various neuroimage analyses, and, instead, manual delineation of areas of interest must be performed in order to evaluate a specific structure. For this reason, we propose an atlas of the rabbit brain based on magnetic resonance imaging, including both structural and diffusion weighted, that can be used for the automatic parcellation of the rabbit brain. Ten individual atlases, as well as an average template and probabilistic maps of the anatomical regions were built. In addition, an example of automatic segmentation based on this atlas is described.
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spelling pubmed-36995902013-07-10 A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation Muñoz-Moreno, Emma Arbat-Plana, Ariadna Batalle, Dafnis Soria, Guadalupe Illa, Miriam Prats-Galino, Alberto Eixarch, Elisenda Gratacos, Eduard PLoS One Research Article Rabbit brain has been used in several works for the analysis of neurodevelopment. However, there are not specific digital rabbit brain atlases that allow an automatic identification of brain regions, which is a crucial step for various neuroimage analyses, and, instead, manual delineation of areas of interest must be performed in order to evaluate a specific structure. For this reason, we propose an atlas of the rabbit brain based on magnetic resonance imaging, including both structural and diffusion weighted, that can be used for the automatic parcellation of the rabbit brain. Ten individual atlases, as well as an average template and probabilistic maps of the anatomical regions were built. In addition, an example of automatic segmentation based on this atlas is described. Public Library of Science 2013-07-02 /pmc/articles/PMC3699590/ /pubmed/23844007 http://dx.doi.org/10.1371/journal.pone.0067418 Text en © 2013 Muñoz-Moreno et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Muñoz-Moreno, Emma
Arbat-Plana, Ariadna
Batalle, Dafnis
Soria, Guadalupe
Illa, Miriam
Prats-Galino, Alberto
Eixarch, Elisenda
Gratacos, Eduard
A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation
title A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation
title_full A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation
title_fullStr A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation
title_full_unstemmed A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation
title_short A Magnetic Resonance Image Based Atlas of the Rabbit Brain for Automatic Parcellation
title_sort magnetic resonance image based atlas of the rabbit brain for automatic parcellation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3699590/
https://www.ncbi.nlm.nih.gov/pubmed/23844007
http://dx.doi.org/10.1371/journal.pone.0067418
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