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Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions

We propose an approach for approximating electrostatic charge distributions with a small number of point charges to optimally represent the original charge distribution. By construction, the proposed optimal point charge approximation (OPCA) retains many of the useful properties of point multipole e...

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Autores principales: Anandakrishnan, Ramu, Baker, Charles, Izadi, Saeed, Onufriev, Alexey V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3701554/
https://www.ncbi.nlm.nih.gov/pubmed/23861790
http://dx.doi.org/10.1371/journal.pone.0067715
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author Anandakrishnan, Ramu
Baker, Charles
Izadi, Saeed
Onufriev, Alexey V.
author_facet Anandakrishnan, Ramu
Baker, Charles
Izadi, Saeed
Onufriev, Alexey V.
author_sort Anandakrishnan, Ramu
collection PubMed
description We propose an approach for approximating electrostatic charge distributions with a small number of point charges to optimally represent the original charge distribution. By construction, the proposed optimal point charge approximation (OPCA) retains many of the useful properties of point multipole expansion, including the same far-field asymptotic behavior of the approximate potential. A general framework for numerically computing OPCA, for any given number of approximating charges, is described. We then derive a 2-charge practical point charge approximation, PPCA, which approximates the 2-charge OPCA via closed form analytical expressions, and test the PPCA on a set of charge distributions relevant to biomolecular modeling. We measure the accuracy of the new approximations as the RMS error in the electrostatic potential relative to that produced by the original charge distribution, at a distance [Image: see text] the extent of the charge distribution–the mid-field. The error for the 2-charge PPCA is found to be on average 23% smaller than that of optimally placed point dipole approximation, and comparable to that of the point quadrupole approximation. The standard deviation in RMS error for the 2-charge PPCA is 53% lower than that of the optimal point dipole approximation, and comparable to that of the point quadrupole approximation. We also calculate the 3-charge OPCA for representing the gas phase quantum mechanical charge distribution of a water molecule. The electrostatic potential calculated by the 3-charge OPCA for water, in the mid-field (2.8 Å from the oxygen atom), is on average 33.3% more accurate than the potential due to the point multipole expansion up to the octupole order. Compared to a 3 point charge approximation in which the charges are placed on the atom centers, the 3-charge OPCA is seven times more accurate, by RMS error. The maximum error at the oxygen-Na distance (2.23 Å ) is half that of the point multipole expansion up to the octupole order.
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spelling pubmed-37015542013-07-16 Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions Anandakrishnan, Ramu Baker, Charles Izadi, Saeed Onufriev, Alexey V. PLoS One Research Article We propose an approach for approximating electrostatic charge distributions with a small number of point charges to optimally represent the original charge distribution. By construction, the proposed optimal point charge approximation (OPCA) retains many of the useful properties of point multipole expansion, including the same far-field asymptotic behavior of the approximate potential. A general framework for numerically computing OPCA, for any given number of approximating charges, is described. We then derive a 2-charge practical point charge approximation, PPCA, which approximates the 2-charge OPCA via closed form analytical expressions, and test the PPCA on a set of charge distributions relevant to biomolecular modeling. We measure the accuracy of the new approximations as the RMS error in the electrostatic potential relative to that produced by the original charge distribution, at a distance [Image: see text] the extent of the charge distribution–the mid-field. The error for the 2-charge PPCA is found to be on average 23% smaller than that of optimally placed point dipole approximation, and comparable to that of the point quadrupole approximation. The standard deviation in RMS error for the 2-charge PPCA is 53% lower than that of the optimal point dipole approximation, and comparable to that of the point quadrupole approximation. We also calculate the 3-charge OPCA for representing the gas phase quantum mechanical charge distribution of a water molecule. The electrostatic potential calculated by the 3-charge OPCA for water, in the mid-field (2.8 Å from the oxygen atom), is on average 33.3% more accurate than the potential due to the point multipole expansion up to the octupole order. Compared to a 3 point charge approximation in which the charges are placed on the atom centers, the 3-charge OPCA is seven times more accurate, by RMS error. The maximum error at the oxygen-Na distance (2.23 Å ) is half that of the point multipole expansion up to the octupole order. Public Library of Science 2013-07-04 /pmc/articles/PMC3701554/ /pubmed/23861790 http://dx.doi.org/10.1371/journal.pone.0067715 Text en © 2013 Anandakrishnan et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Anandakrishnan, Ramu
Baker, Charles
Izadi, Saeed
Onufriev, Alexey V.
Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions
title Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions
title_full Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions
title_fullStr Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions
title_full_unstemmed Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions
title_short Point Charges Optimally Placed to Represent the Multipole Expansion of Charge Distributions
title_sort point charges optimally placed to represent the multipole expansion of charge distributions
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3701554/
https://www.ncbi.nlm.nih.gov/pubmed/23861790
http://dx.doi.org/10.1371/journal.pone.0067715
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