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An improved level set method for vertebra CT image segmentation

BACKGROUND: Clinical diagnosis and therapy for the lumbar disc herniation requires accurate vertebra segmentation. The complex anatomical structure and the degenerative deformations of the vertebrae makes its segmentation challenging. METHODS: An improved level set method, namely edge- and region-ba...

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Detalles Bibliográficos
Autores principales: Huang, Juying, Jian, Fengzeng, Wu, Hao, Li, Haiyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3701568/
https://www.ncbi.nlm.nih.gov/pubmed/23714300
http://dx.doi.org/10.1186/1475-925X-12-48
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author Huang, Juying
Jian, Fengzeng
Wu, Hao
Li, Haiyun
author_facet Huang, Juying
Jian, Fengzeng
Wu, Hao
Li, Haiyun
author_sort Huang, Juying
collection PubMed
description BACKGROUND: Clinical diagnosis and therapy for the lumbar disc herniation requires accurate vertebra segmentation. The complex anatomical structure and the degenerative deformations of the vertebrae makes its segmentation challenging. METHODS: An improved level set method, namely edge- and region-based level set method (ERBLS), is proposed for vertebra CT images segmentation. By considering the gradient information and local region characteristics of images, the proposed model can efficiently segment images with intensity inhomogeneity and blurry or discontinuous boundaries. To reduce the dependency on manual initialization in many active contour models and for an automatic segmentation, a simple initialization method for the level set function is built, which utilizes the Otsu threshold. In addition, the need of the costly re-initialization procedure is completely eliminated. RESULTS: Experimental results on both synthetic and real images demonstrated that the proposed ERBLS model is very robust and efficient. Compared with the well-known local binary fitting (LBF) model, our method is much more computationally efficient and much less sensitive to the initial contour. The proposed method has also applied to 56 patient data sets and produced very promising results. CONCLUSIONS: An improved level set method suitable for vertebra CT images segmentation is proposed. It has the flexibility of segmenting the vertebra CT images with blurry or discontinuous edges, internal inhomogeneity and no need of re-initialization.
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spelling pubmed-37015682013-07-10 An improved level set method for vertebra CT image segmentation Huang, Juying Jian, Fengzeng Wu, Hao Li, Haiyun Biomed Eng Online Research BACKGROUND: Clinical diagnosis and therapy for the lumbar disc herniation requires accurate vertebra segmentation. The complex anatomical structure and the degenerative deformations of the vertebrae makes its segmentation challenging. METHODS: An improved level set method, namely edge- and region-based level set method (ERBLS), is proposed for vertebra CT images segmentation. By considering the gradient information and local region characteristics of images, the proposed model can efficiently segment images with intensity inhomogeneity and blurry or discontinuous boundaries. To reduce the dependency on manual initialization in many active contour models and for an automatic segmentation, a simple initialization method for the level set function is built, which utilizes the Otsu threshold. In addition, the need of the costly re-initialization procedure is completely eliminated. RESULTS: Experimental results on both synthetic and real images demonstrated that the proposed ERBLS model is very robust and efficient. Compared with the well-known local binary fitting (LBF) model, our method is much more computationally efficient and much less sensitive to the initial contour. The proposed method has also applied to 56 patient data sets and produced very promising results. CONCLUSIONS: An improved level set method suitable for vertebra CT images segmentation is proposed. It has the flexibility of segmenting the vertebra CT images with blurry or discontinuous edges, internal inhomogeneity and no need of re-initialization. BioMed Central 2013-05-28 /pmc/articles/PMC3701568/ /pubmed/23714300 http://dx.doi.org/10.1186/1475-925X-12-48 Text en Copyright © 2013 Huang et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Huang, Juying
Jian, Fengzeng
Wu, Hao
Li, Haiyun
An improved level set method for vertebra CT image segmentation
title An improved level set method for vertebra CT image segmentation
title_full An improved level set method for vertebra CT image segmentation
title_fullStr An improved level set method for vertebra CT image segmentation
title_full_unstemmed An improved level set method for vertebra CT image segmentation
title_short An improved level set method for vertebra CT image segmentation
title_sort improved level set method for vertebra ct image segmentation
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3701568/
https://www.ncbi.nlm.nih.gov/pubmed/23714300
http://dx.doi.org/10.1186/1475-925X-12-48
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