Cargando…
A genome-wide association study of bronchodilator response in asthmatics
Reversibility of airway obstruction in response to β(2)-agonists is highly variable among asthmatics, which is partially attributed to genetic factors. In a genome-wide association study of acute bronchodilator response (BDR) to inhaled albuterol, 534,290 single nucleotide polymorphisms (SNPs) were...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3706515/ https://www.ncbi.nlm.nih.gov/pubmed/23508266 http://dx.doi.org/10.1038/tpj.2013.5 |
_version_ | 1782476567961665536 |
---|---|
author | Duan, Qing Ling Lasky-Su, Jessica Himes, Blanca E. Qiu, Weiliang Litonjua, Augusto A. Damask, Amy Lazarus, Ross Klanderman, Barbara Irvin, Charles G. Peters, Stephen P. Hanrahan, John P. Lima, John J. Martinez, Fernando D. Mauger, David Chinchilli, Vernon M. Soto-Quiros, Manuel Avila, Lydiana Celedón, Juan C. Lange, Christoph Weiss, Scott T. Tantisira, Kelan G. |
author_facet | Duan, Qing Ling Lasky-Su, Jessica Himes, Blanca E. Qiu, Weiliang Litonjua, Augusto A. Damask, Amy Lazarus, Ross Klanderman, Barbara Irvin, Charles G. Peters, Stephen P. Hanrahan, John P. Lima, John J. Martinez, Fernando D. Mauger, David Chinchilli, Vernon M. Soto-Quiros, Manuel Avila, Lydiana Celedón, Juan C. Lange, Christoph Weiss, Scott T. Tantisira, Kelan G. |
author_sort | Duan, Qing Ling |
collection | PubMed |
description | Reversibility of airway obstruction in response to β(2)-agonists is highly variable among asthmatics, which is partially attributed to genetic factors. In a genome-wide association study of acute bronchodilator response (BDR) to inhaled albuterol, 534,290 single nucleotide polymorphisms (SNPs) were tested in 403 white trios from the Childhood Asthma Management Program using five statistical models to determine the most robust genetic associations. The primary replication phase included 1397 polymorphisms in three asthma trials (pooled n=764). The second replication phase tested 13 SNPs in three additional asthma populations (n=241, n=215, and n=592). An intergenic SNP on chromosome 10, rs11252394, proximal to several excellent biological candidates, significantly replicated (p=1.98×10(−7)) in the primary replication trials. An intronic SNP (rs6988229) in the collagen (COL22A1) locus also provided strong replication signals (p=8.51×10(−6)). This study applied a robust approach for testing the genetic basis of BDR and identified novel loci associated with this drug response in asthmatics. |
format | Online Article Text |
id | pubmed-3706515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
record_format | MEDLINE/PubMed |
spelling | pubmed-37065152014-08-01 A genome-wide association study of bronchodilator response in asthmatics Duan, Qing Ling Lasky-Su, Jessica Himes, Blanca E. Qiu, Weiliang Litonjua, Augusto A. Damask, Amy Lazarus, Ross Klanderman, Barbara Irvin, Charles G. Peters, Stephen P. Hanrahan, John P. Lima, John J. Martinez, Fernando D. Mauger, David Chinchilli, Vernon M. Soto-Quiros, Manuel Avila, Lydiana Celedón, Juan C. Lange, Christoph Weiss, Scott T. Tantisira, Kelan G. Pharmacogenomics J Article Reversibility of airway obstruction in response to β(2)-agonists is highly variable among asthmatics, which is partially attributed to genetic factors. In a genome-wide association study of acute bronchodilator response (BDR) to inhaled albuterol, 534,290 single nucleotide polymorphisms (SNPs) were tested in 403 white trios from the Childhood Asthma Management Program using five statistical models to determine the most robust genetic associations. The primary replication phase included 1397 polymorphisms in three asthma trials (pooled n=764). The second replication phase tested 13 SNPs in three additional asthma populations (n=241, n=215, and n=592). An intergenic SNP on chromosome 10, rs11252394, proximal to several excellent biological candidates, significantly replicated (p=1.98×10(−7)) in the primary replication trials. An intronic SNP (rs6988229) in the collagen (COL22A1) locus also provided strong replication signals (p=8.51×10(−6)). This study applied a robust approach for testing the genetic basis of BDR and identified novel loci associated with this drug response in asthmatics. 2013-03-19 2014-02 /pmc/articles/PMC3706515/ /pubmed/23508266 http://dx.doi.org/10.1038/tpj.2013.5 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Duan, Qing Ling Lasky-Su, Jessica Himes, Blanca E. Qiu, Weiliang Litonjua, Augusto A. Damask, Amy Lazarus, Ross Klanderman, Barbara Irvin, Charles G. Peters, Stephen P. Hanrahan, John P. Lima, John J. Martinez, Fernando D. Mauger, David Chinchilli, Vernon M. Soto-Quiros, Manuel Avila, Lydiana Celedón, Juan C. Lange, Christoph Weiss, Scott T. Tantisira, Kelan G. A genome-wide association study of bronchodilator response in asthmatics |
title | A genome-wide association study of bronchodilator response in asthmatics |
title_full | A genome-wide association study of bronchodilator response in asthmatics |
title_fullStr | A genome-wide association study of bronchodilator response in asthmatics |
title_full_unstemmed | A genome-wide association study of bronchodilator response in asthmatics |
title_short | A genome-wide association study of bronchodilator response in asthmatics |
title_sort | genome-wide association study of bronchodilator response in asthmatics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3706515/ https://www.ncbi.nlm.nih.gov/pubmed/23508266 http://dx.doi.org/10.1038/tpj.2013.5 |
work_keys_str_mv | AT duanqingling agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT laskysujessica agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT himesblancae agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT qiuweiliang agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT litonjuaaugustoa agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT damaskamy agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT lazarusross agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT klandermanbarbara agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT irvincharlesg agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT petersstephenp agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT hanrahanjohnp agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT limajohnj agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT martinezfernandod agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT maugerdavid agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT chinchillivernonm agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT sotoquirosmanuel agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT avilalydiana agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT celedonjuanc agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT langechristoph agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT weissscottt agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT tantisirakelang agenomewideassociationstudyofbronchodilatorresponseinasthmatics AT duanqingling genomewideassociationstudyofbronchodilatorresponseinasthmatics AT laskysujessica genomewideassociationstudyofbronchodilatorresponseinasthmatics AT himesblancae genomewideassociationstudyofbronchodilatorresponseinasthmatics AT qiuweiliang genomewideassociationstudyofbronchodilatorresponseinasthmatics AT litonjuaaugustoa genomewideassociationstudyofbronchodilatorresponseinasthmatics AT damaskamy genomewideassociationstudyofbronchodilatorresponseinasthmatics AT lazarusross genomewideassociationstudyofbronchodilatorresponseinasthmatics AT klandermanbarbara genomewideassociationstudyofbronchodilatorresponseinasthmatics AT irvincharlesg genomewideassociationstudyofbronchodilatorresponseinasthmatics AT petersstephenp genomewideassociationstudyofbronchodilatorresponseinasthmatics AT hanrahanjohnp genomewideassociationstudyofbronchodilatorresponseinasthmatics AT limajohnj genomewideassociationstudyofbronchodilatorresponseinasthmatics AT martinezfernandod genomewideassociationstudyofbronchodilatorresponseinasthmatics AT maugerdavid genomewideassociationstudyofbronchodilatorresponseinasthmatics AT chinchillivernonm genomewideassociationstudyofbronchodilatorresponseinasthmatics AT sotoquirosmanuel genomewideassociationstudyofbronchodilatorresponseinasthmatics AT avilalydiana genomewideassociationstudyofbronchodilatorresponseinasthmatics AT celedonjuanc genomewideassociationstudyofbronchodilatorresponseinasthmatics AT langechristoph genomewideassociationstudyofbronchodilatorresponseinasthmatics AT weissscottt genomewideassociationstudyofbronchodilatorresponseinasthmatics AT tantisirakelang genomewideassociationstudyofbronchodilatorresponseinasthmatics |