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Genome-Wide Association Study of Serum Selenium Concentrations
Selenium is an essential trace element and circulating selenium concentrations have been associated with a wide range of diseases. Candidate gene studies suggest that circulating selenium concentrations may be impacted by genetic variation; however, no study has comprehensively investigated this hyp...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708345/ https://www.ncbi.nlm.nih.gov/pubmed/23698163 http://dx.doi.org/10.3390/nu5051706 |
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author | Gong, Jian Hsu, Li Harrison, Tabitha King, Irena B. Stürup, Stefan Song, Xiaoling Duggan, David Liu, Yan Hutter, Carolyn Chanock, Stephen J. Eaton, Charles B. Marshall, James R. Peters, Ulrike |
author_facet | Gong, Jian Hsu, Li Harrison, Tabitha King, Irena B. Stürup, Stefan Song, Xiaoling Duggan, David Liu, Yan Hutter, Carolyn Chanock, Stephen J. Eaton, Charles B. Marshall, James R. Peters, Ulrike |
author_sort | Gong, Jian |
collection | PubMed |
description | Selenium is an essential trace element and circulating selenium concentrations have been associated with a wide range of diseases. Candidate gene studies suggest that circulating selenium concentrations may be impacted by genetic variation; however, no study has comprehensively investigated this hypothesis. Therefore, we conducted a two-stage genome-wide association study to identify genetic variants associated with serum selenium concentrations in 1203 European descents from two cohorts: the Prostate, Lung, Colorectal, and Ovarian (PLCO) Cancer Screening and the Women’s Health Initiative (WHI). We tested association between 2,474,333 single nucleotide polymorphisms (SNPs) and serum selenium concentrations using linear regression models. In the first stage (PLCO) 41 SNPs clustered in 15 regions had p < 1 × 10(−5). None of these 41 SNPs reached the significant threshold (p = 0.05/15 regions = 0.003) in the second stage (WHI). Three SNPs had p < 0.05 in the second stage (rs1395479 and rs1506807 in 4q34.3/AGA-NEIL3; and rs891684 in 17q24.3/SLC39A11) and had p between 2.62 × 10(−7) and 4.04 × 10(−7) in the combined analysis (PLCO + WHI). Additional studies are needed to replicate these findings. Identification of genetic variation that impacts selenium concentrations may contribute to a better understanding of which genes regulate circulating selenium concentrations. |
format | Online Article Text |
id | pubmed-3708345 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-37083452013-07-11 Genome-Wide Association Study of Serum Selenium Concentrations Gong, Jian Hsu, Li Harrison, Tabitha King, Irena B. Stürup, Stefan Song, Xiaoling Duggan, David Liu, Yan Hutter, Carolyn Chanock, Stephen J. Eaton, Charles B. Marshall, James R. Peters, Ulrike Nutrients Article Selenium is an essential trace element and circulating selenium concentrations have been associated with a wide range of diseases. Candidate gene studies suggest that circulating selenium concentrations may be impacted by genetic variation; however, no study has comprehensively investigated this hypothesis. Therefore, we conducted a two-stage genome-wide association study to identify genetic variants associated with serum selenium concentrations in 1203 European descents from two cohorts: the Prostate, Lung, Colorectal, and Ovarian (PLCO) Cancer Screening and the Women’s Health Initiative (WHI). We tested association between 2,474,333 single nucleotide polymorphisms (SNPs) and serum selenium concentrations using linear regression models. In the first stage (PLCO) 41 SNPs clustered in 15 regions had p < 1 × 10(−5). None of these 41 SNPs reached the significant threshold (p = 0.05/15 regions = 0.003) in the second stage (WHI). Three SNPs had p < 0.05 in the second stage (rs1395479 and rs1506807 in 4q34.3/AGA-NEIL3; and rs891684 in 17q24.3/SLC39A11) and had p between 2.62 × 10(−7) and 4.04 × 10(−7) in the combined analysis (PLCO + WHI). Additional studies are needed to replicate these findings. Identification of genetic variation that impacts selenium concentrations may contribute to a better understanding of which genes regulate circulating selenium concentrations. MDPI 2013-05-21 /pmc/articles/PMC3708345/ /pubmed/23698163 http://dx.doi.org/10.3390/nu5051706 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Gong, Jian Hsu, Li Harrison, Tabitha King, Irena B. Stürup, Stefan Song, Xiaoling Duggan, David Liu, Yan Hutter, Carolyn Chanock, Stephen J. Eaton, Charles B. Marshall, James R. Peters, Ulrike Genome-Wide Association Study of Serum Selenium Concentrations |
title | Genome-Wide Association Study of Serum Selenium Concentrations |
title_full | Genome-Wide Association Study of Serum Selenium Concentrations |
title_fullStr | Genome-Wide Association Study of Serum Selenium Concentrations |
title_full_unstemmed | Genome-Wide Association Study of Serum Selenium Concentrations |
title_short | Genome-Wide Association Study of Serum Selenium Concentrations |
title_sort | genome-wide association study of serum selenium concentrations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708345/ https://www.ncbi.nlm.nih.gov/pubmed/23698163 http://dx.doi.org/10.3390/nu5051706 |
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