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lncRNome: a comprehensive knowledgebase of human long noncoding RNAs
The advent of high-throughput genome scale technologies has enabled us to unravel a large amount of the previously unknown transcriptionally active regions of the genome. Recent genome-wide studies have provided annotations of a large repertoire of various classes of noncoding transcripts. Long nonc...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708617/ https://www.ncbi.nlm.nih.gov/pubmed/23846593 http://dx.doi.org/10.1093/database/bat034 |
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author | Bhartiya, Deeksha Pal, Koustav Ghosh, Sourav Kapoor, Shruti Jalali, Saakshi Panwar, Bharat Jain, Sakshi Sati, Satish Sengupta, Shantanu Sachidanandan, Chetana Raghava, Gajendra Pal Singh Sivasubbu, Sridhar Scaria, Vinod |
author_facet | Bhartiya, Deeksha Pal, Koustav Ghosh, Sourav Kapoor, Shruti Jalali, Saakshi Panwar, Bharat Jain, Sakshi Sati, Satish Sengupta, Shantanu Sachidanandan, Chetana Raghava, Gajendra Pal Singh Sivasubbu, Sridhar Scaria, Vinod |
author_sort | Bhartiya, Deeksha |
collection | PubMed |
description | The advent of high-throughput genome scale technologies has enabled us to unravel a large amount of the previously unknown transcriptionally active regions of the genome. Recent genome-wide studies have provided annotations of a large repertoire of various classes of noncoding transcripts. Long noncoding RNAs (lncRNAs) form a major proportion of these novel annotated noncoding transcripts, and presently known to be involved in a number of functionally distinct biological processes. Over 18 000 transcripts are presently annotated as lncRNA, and encompass previously annotated classes of noncoding transcripts including large intergenic noncoding RNA, antisense RNA and processed pseudogenes. There is a significant gap in the resources providing a stable annotation, cross-referencing and biologically relevant information. lncRNome has been envisioned with the aim of filling this gap by integrating annotations on a wide variety of biologically significant information into a comprehensive knowledgebase. To the best of our knowledge, lncRNome is one of the largest and most comprehensive resources for lncRNAs. Database URL: http://genome.igib.res.in/lncRNome |
format | Online Article Text |
id | pubmed-3708617 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-37086172013-07-11 lncRNome: a comprehensive knowledgebase of human long noncoding RNAs Bhartiya, Deeksha Pal, Koustav Ghosh, Sourav Kapoor, Shruti Jalali, Saakshi Panwar, Bharat Jain, Sakshi Sati, Satish Sengupta, Shantanu Sachidanandan, Chetana Raghava, Gajendra Pal Singh Sivasubbu, Sridhar Scaria, Vinod Database (Oxford) Original Article The advent of high-throughput genome scale technologies has enabled us to unravel a large amount of the previously unknown transcriptionally active regions of the genome. Recent genome-wide studies have provided annotations of a large repertoire of various classes of noncoding transcripts. Long noncoding RNAs (lncRNAs) form a major proportion of these novel annotated noncoding transcripts, and presently known to be involved in a number of functionally distinct biological processes. Over 18 000 transcripts are presently annotated as lncRNA, and encompass previously annotated classes of noncoding transcripts including large intergenic noncoding RNA, antisense RNA and processed pseudogenes. There is a significant gap in the resources providing a stable annotation, cross-referencing and biologically relevant information. lncRNome has been envisioned with the aim of filling this gap by integrating annotations on a wide variety of biologically significant information into a comprehensive knowledgebase. To the best of our knowledge, lncRNome is one of the largest and most comprehensive resources for lncRNAs. Database URL: http://genome.igib.res.in/lncRNome Oxford University Press 2013-07-11 /pmc/articles/PMC3708617/ /pubmed/23846593 http://dx.doi.org/10.1093/database/bat034 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Bhartiya, Deeksha Pal, Koustav Ghosh, Sourav Kapoor, Shruti Jalali, Saakshi Panwar, Bharat Jain, Sakshi Sati, Satish Sengupta, Shantanu Sachidanandan, Chetana Raghava, Gajendra Pal Singh Sivasubbu, Sridhar Scaria, Vinod lncRNome: a comprehensive knowledgebase of human long noncoding RNAs |
title | lncRNome: a comprehensive knowledgebase of human long noncoding RNAs |
title_full | lncRNome: a comprehensive knowledgebase of human long noncoding RNAs |
title_fullStr | lncRNome: a comprehensive knowledgebase of human long noncoding RNAs |
title_full_unstemmed | lncRNome: a comprehensive knowledgebase of human long noncoding RNAs |
title_short | lncRNome: a comprehensive knowledgebase of human long noncoding RNAs |
title_sort | lncrnome: a comprehensive knowledgebase of human long noncoding rnas |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708617/ https://www.ncbi.nlm.nih.gov/pubmed/23846593 http://dx.doi.org/10.1093/database/bat034 |
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