Cargando…

Technology platform development for targeted plasma metabolites in human heart failure

BACKGROUND: Heart failure is a multifactorial disease associated with staggeringly high morbidity and motility. Recently, alterations of multiple metabolites have been implicated in heart failure; however, the lack of an effective technology platform to assess these metabolites has limited our under...

Descripción completa

Detalles Bibliográficos
Autores principales: Chan, CY X’avia, Khan, Anjum A, Choi, JH Howard, Ng, CM Dominic, Cadeiras, Martin, Deng, Mario, Ping, Peipei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708771/
https://www.ncbi.nlm.nih.gov/pubmed/23826926
http://dx.doi.org/10.1186/1559-0275-10-7
_version_ 1782276656550903808
author Chan, CY X’avia
Khan, Anjum A
Choi, JH Howard
Ng, CM Dominic
Cadeiras, Martin
Deng, Mario
Ping, Peipei
author_facet Chan, CY X’avia
Khan, Anjum A
Choi, JH Howard
Ng, CM Dominic
Cadeiras, Martin
Deng, Mario
Ping, Peipei
author_sort Chan, CY X’avia
collection PubMed
description BACKGROUND: Heart failure is a multifactorial disease associated with staggeringly high morbidity and motility. Recently, alterations of multiple metabolites have been implicated in heart failure; however, the lack of an effective technology platform to assess these metabolites has limited our understanding on how they contribute to this disease phenotype. We have successfully developed a new workflow combining specific sample preparation with tandem mass spectrometry that enables us to extract most of the targeted metabolites. 19 metabolites were chosen ascribing to their biological relevance to heart failure, including extracellular matrix remodeling, inflammation, insulin resistance, renal dysfunction, and cardioprotection against ischemic injury. RESULTS: In this report, we systematically engineered, optimized and refined a protocol applicable to human plasma samples; this study contributes to the methodology development with respect to deproteinization, incubation, reconstitution, and detection with mass spectrometry. The deproteinization step was optimized with 20% methanol/ethanol at a plasma:solvent ratio of 1:3. Subsequently, an incubation step was implemented which remarkably enhanced the metabolite signals and the number of metabolite peaks detected by mass spectrometry in both positive and negative modes. With respect to the step of reconstitution, 0.1% formic acid was designated as the reconstitution solvent vs. 6.5 mM ammonium bicarbonate, based on the comparable number of metabolite peaks detected in both solvents, and yet the signal detected in the former was higher. By adapting this finalized protocol, we were able to retrieve 13 out of 19 targeted metabolites from human plasma. CONCLUSIONS: We have successfully devised a simple albeit effective workflow for the targeted plasma metabolites relevant to human heart failure. This will be employed in tandem with high throughput liquid chromatography mass spectrometry platform to validate and characterize these potential metabolic biomarkers for diagnostic and therapeutic development of heart failure patients.
format Online
Article
Text
id pubmed-3708771
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Springer
record_format MEDLINE/PubMed
spelling pubmed-37087712013-07-12 Technology platform development for targeted plasma metabolites in human heart failure Chan, CY X’avia Khan, Anjum A Choi, JH Howard Ng, CM Dominic Cadeiras, Martin Deng, Mario Ping, Peipei Clin Proteomics Research BACKGROUND: Heart failure is a multifactorial disease associated with staggeringly high morbidity and motility. Recently, alterations of multiple metabolites have been implicated in heart failure; however, the lack of an effective technology platform to assess these metabolites has limited our understanding on how they contribute to this disease phenotype. We have successfully developed a new workflow combining specific sample preparation with tandem mass spectrometry that enables us to extract most of the targeted metabolites. 19 metabolites were chosen ascribing to their biological relevance to heart failure, including extracellular matrix remodeling, inflammation, insulin resistance, renal dysfunction, and cardioprotection against ischemic injury. RESULTS: In this report, we systematically engineered, optimized and refined a protocol applicable to human plasma samples; this study contributes to the methodology development with respect to deproteinization, incubation, reconstitution, and detection with mass spectrometry. The deproteinization step was optimized with 20% methanol/ethanol at a plasma:solvent ratio of 1:3. Subsequently, an incubation step was implemented which remarkably enhanced the metabolite signals and the number of metabolite peaks detected by mass spectrometry in both positive and negative modes. With respect to the step of reconstitution, 0.1% formic acid was designated as the reconstitution solvent vs. 6.5 mM ammonium bicarbonate, based on the comparable number of metabolite peaks detected in both solvents, and yet the signal detected in the former was higher. By adapting this finalized protocol, we were able to retrieve 13 out of 19 targeted metabolites from human plasma. CONCLUSIONS: We have successfully devised a simple albeit effective workflow for the targeted plasma metabolites relevant to human heart failure. This will be employed in tandem with high throughput liquid chromatography mass spectrometry platform to validate and characterize these potential metabolic biomarkers for diagnostic and therapeutic development of heart failure patients. Springer 2013-07-04 /pmc/articles/PMC3708771/ /pubmed/23826926 http://dx.doi.org/10.1186/1559-0275-10-7 Text en Copyright ©2013 Chan et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Chan, CY X’avia
Khan, Anjum A
Choi, JH Howard
Ng, CM Dominic
Cadeiras, Martin
Deng, Mario
Ping, Peipei
Technology platform development for targeted plasma metabolites in human heart failure
title Technology platform development for targeted plasma metabolites in human heart failure
title_full Technology platform development for targeted plasma metabolites in human heart failure
title_fullStr Technology platform development for targeted plasma metabolites in human heart failure
title_full_unstemmed Technology platform development for targeted plasma metabolites in human heart failure
title_short Technology platform development for targeted plasma metabolites in human heart failure
title_sort technology platform development for targeted plasma metabolites in human heart failure
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708771/
https://www.ncbi.nlm.nih.gov/pubmed/23826926
http://dx.doi.org/10.1186/1559-0275-10-7
work_keys_str_mv AT chancyxavia technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure
AT khananjuma technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure
AT choijhhoward technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure
AT ngcmdominic technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure
AT cadeirasmartin technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure
AT dengmario technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure
AT pingpeipei technologyplatformdevelopmentfortargetedplasmametabolitesinhumanheartfailure