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Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams
UVB radiation suppresses photosynthesis and protein biosynthesis in plants, which in turn decreases growth and productivity. Here, an ultraviolet-B (UVB)-tolerant rice mutant, utr319 (UV Tolerant Rice 319), was isolated from a mutagenized population derived from 2500 M(1) seeds (of the UVB-resistant...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3709678/ https://www.ncbi.nlm.nih.gov/pubmed/23381954 http://dx.doi.org/10.1093/jrr/rrt007 |
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author | Takano, Nao Takahashi, Yuko Yamamoto, Mitsuru Teranishi, Mika Yamaguchi, Hiroko Sakamoto, Ayako N. Hase, Yoshihiro Fujisawa, Hiroko Wu, Jianzhong Matsumoto, Takashi Toki, Seiichi Hidema, Jun |
author_facet | Takano, Nao Takahashi, Yuko Yamamoto, Mitsuru Teranishi, Mika Yamaguchi, Hiroko Sakamoto, Ayako N. Hase, Yoshihiro Fujisawa, Hiroko Wu, Jianzhong Matsumoto, Takashi Toki, Seiichi Hidema, Jun |
author_sort | Takano, Nao |
collection | PubMed |
description | UVB radiation suppresses photosynthesis and protein biosynthesis in plants, which in turn decreases growth and productivity. Here, an ultraviolet-B (UVB)-tolerant rice mutant, utr319 (UV Tolerant Rice 319), was isolated from a mutagenized population derived from 2500 M(1) seeds (of the UVB-resistant cultivar ‘Sasanishiki’) that were exposed to carbon ions. The utr319 mutant was more tolerant to UVB than the wild type. Neither the levels of UVB-induced cyclobutane pyrimidine dimers (CPDs) or (6-4) pyrimidine-pyrimidone photodimers [(6-4) photoproducts], nor the repair of CPDs or (6-4) photoproducts, was altered in the utr319 mutant. Thus, the utr319 mutant may be impaired in the production of a previously unidentified factor that confers UVB tolerance. To identify the mutated region in the utr319 mutant, microarray-based comparative genomic hybridization analysis was performed. Two adjacent genes on chromosome 7, Os07g0264900 and Os07g0265100, were predicted to represent the mutant allele. Sequence analysis of the chromosome region in utr319 revealed a deletion of 45 419 bp. RNAi analysis indicated that Os07g0265100 is most likely the mutated gene. Database analysis indicated that the Os07g0265100 gene, UTR319, encodes a putative protein with unknown characteristics or function. In addition, the homologs of UTR319 are conserved only among land plants. Therefore, utr319 is a novel UVB-tolerant rice mutant and UTR319 may be crucial for the determination of UVB sensitivity in rice, although the function of UTR319 has not yet been determined. |
format | Online Article Text |
id | pubmed-3709678 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-37096782013-07-15 Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams Takano, Nao Takahashi, Yuko Yamamoto, Mitsuru Teranishi, Mika Yamaguchi, Hiroko Sakamoto, Ayako N. Hase, Yoshihiro Fujisawa, Hiroko Wu, Jianzhong Matsumoto, Takashi Toki, Seiichi Hidema, Jun J Radiat Res Biology UVB radiation suppresses photosynthesis and protein biosynthesis in plants, which in turn decreases growth and productivity. Here, an ultraviolet-B (UVB)-tolerant rice mutant, utr319 (UV Tolerant Rice 319), was isolated from a mutagenized population derived from 2500 M(1) seeds (of the UVB-resistant cultivar ‘Sasanishiki’) that were exposed to carbon ions. The utr319 mutant was more tolerant to UVB than the wild type. Neither the levels of UVB-induced cyclobutane pyrimidine dimers (CPDs) or (6-4) pyrimidine-pyrimidone photodimers [(6-4) photoproducts], nor the repair of CPDs or (6-4) photoproducts, was altered in the utr319 mutant. Thus, the utr319 mutant may be impaired in the production of a previously unidentified factor that confers UVB tolerance. To identify the mutated region in the utr319 mutant, microarray-based comparative genomic hybridization analysis was performed. Two adjacent genes on chromosome 7, Os07g0264900 and Os07g0265100, were predicted to represent the mutant allele. Sequence analysis of the chromosome region in utr319 revealed a deletion of 45 419 bp. RNAi analysis indicated that Os07g0265100 is most likely the mutated gene. Database analysis indicated that the Os07g0265100 gene, UTR319, encodes a putative protein with unknown characteristics or function. In addition, the homologs of UTR319 are conserved only among land plants. Therefore, utr319 is a novel UVB-tolerant rice mutant and UTR319 may be crucial for the determination of UVB sensitivity in rice, although the function of UTR319 has not yet been determined. Oxford University Press 2013-07 2013-02-04 /pmc/articles/PMC3709678/ /pubmed/23381954 http://dx.doi.org/10.1093/jrr/rrt007 Text en © The Author 2013. Published by Oxford University Press on behalf of The Japan Radiation Research Society and Japanese Society for Therapeutic Radiology and Oncology. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Biology Takano, Nao Takahashi, Yuko Yamamoto, Mitsuru Teranishi, Mika Yamaguchi, Hiroko Sakamoto, Ayako N. Hase, Yoshihiro Fujisawa, Hiroko Wu, Jianzhong Matsumoto, Takashi Toki, Seiichi Hidema, Jun Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams |
title | Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams |
title_full | Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams |
title_fullStr | Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams |
title_full_unstemmed | Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams |
title_short | Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams |
title_sort | isolation of a novel uvb-tolerant rice mutant obtained by exposure to carbon-ion beams |
topic | Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3709678/ https://www.ncbi.nlm.nih.gov/pubmed/23381954 http://dx.doi.org/10.1093/jrr/rrt007 |
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