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VBM with viscous fluid registration of gray matter segments in SPM
Improved registration of gray matter segments in SPM has been achieved with the DARTEL algorithm. Previous work from our group suggested, however, that such improvements may not translate to studies of clinical groups. To address the registration issue in atrophic brains, this paper relaxed the cond...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3711012/ https://www.ncbi.nlm.nih.gov/pubmed/23874298 http://dx.doi.org/10.3389/fnagi.2013.00030 |
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author | Pereira, Joao M. S. Acosta-Cabronero, Julio Pengas, George Xiong, Li Nestor, Peter J. Williams, Guy B. |
author_facet | Pereira, Joao M. S. Acosta-Cabronero, Julio Pengas, George Xiong, Li Nestor, Peter J. Williams, Guy B. |
author_sort | Pereira, Joao M. S. |
collection | PubMed |
description | Improved registration of gray matter segments in SPM has been achieved with the DARTEL algorithm. Previous work from our group suggested, however, that such improvements may not translate to studies of clinical groups. To address the registration issue in atrophic brains, this paper relaxed the condition of diffeomorphism, central to DARTEL, and made use of a viscous fluid registration model with limited regularization constraints to register the modulated gray matter probability maps to an intra-population template. Quantitative analysis of the registration results after the additional viscous fluid step showed no worsening of co-localization of fiducials compared to DARTEL or unified segmentation methods, and the resulting voxel based morphometry (VBM) analyses were able to better identify atrophic regions and to produce results with fewer apparent false positives. DARTEL showed great sensitivity to atrophy, but the resulting VBM maps presented broad, amorphous regions of significance that are hard to interpret. We propose that the condition of diffeomorphism is not necessary for basic VBM studies in atrophic populations, but also that it has disadvantages that must be taken into consideration before a study. The presented viscous fluid registration method is proposed for VBM studies to enhance sensitivity and localizing power. |
format | Online Article Text |
id | pubmed-3711012 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-37110122013-07-19 VBM with viscous fluid registration of gray matter segments in SPM Pereira, Joao M. S. Acosta-Cabronero, Julio Pengas, George Xiong, Li Nestor, Peter J. Williams, Guy B. Front Aging Neurosci Neuroscience Improved registration of gray matter segments in SPM has been achieved with the DARTEL algorithm. Previous work from our group suggested, however, that such improvements may not translate to studies of clinical groups. To address the registration issue in atrophic brains, this paper relaxed the condition of diffeomorphism, central to DARTEL, and made use of a viscous fluid registration model with limited regularization constraints to register the modulated gray matter probability maps to an intra-population template. Quantitative analysis of the registration results after the additional viscous fluid step showed no worsening of co-localization of fiducials compared to DARTEL or unified segmentation methods, and the resulting voxel based morphometry (VBM) analyses were able to better identify atrophic regions and to produce results with fewer apparent false positives. DARTEL showed great sensitivity to atrophy, but the resulting VBM maps presented broad, amorphous regions of significance that are hard to interpret. We propose that the condition of diffeomorphism is not necessary for basic VBM studies in atrophic populations, but also that it has disadvantages that must be taken into consideration before a study. The presented viscous fluid registration method is proposed for VBM studies to enhance sensitivity and localizing power. Frontiers Media S.A. 2013-07-15 /pmc/articles/PMC3711012/ /pubmed/23874298 http://dx.doi.org/10.3389/fnagi.2013.00030 Text en Copyright © 2013 Pereira, Acosta-Cabronero, Pengas, Xiong, Nestor and Williams. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Neuroscience Pereira, Joao M. S. Acosta-Cabronero, Julio Pengas, George Xiong, Li Nestor, Peter J. Williams, Guy B. VBM with viscous fluid registration of gray matter segments in SPM |
title | VBM with viscous fluid registration of gray matter segments in SPM |
title_full | VBM with viscous fluid registration of gray matter segments in SPM |
title_fullStr | VBM with viscous fluid registration of gray matter segments in SPM |
title_full_unstemmed | VBM with viscous fluid registration of gray matter segments in SPM |
title_short | VBM with viscous fluid registration of gray matter segments in SPM |
title_sort | vbm with viscous fluid registration of gray matter segments in spm |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3711012/ https://www.ncbi.nlm.nih.gov/pubmed/23874298 http://dx.doi.org/10.3389/fnagi.2013.00030 |
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