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SPANNER: taxonomic assignment of sequences using pyramid matching of similarity profiles
Background: Homology-based taxonomic assignment is impeded by differences between the unassigned read and reference database, forcing a rank-specific classification to the closest (and possibly incorrect) reference lineage. This assignment may be correct only to a general rank (e.g. order) and incor...
| Autores principales: | , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2013
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3712219/ https://www.ncbi.nlm.nih.gov/pubmed/23732273 http://dx.doi.org/10.1093/bioinformatics/btt313 |