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Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism

Formosan subterranean termites, Coptotermes formosanus Shiraki, live socially in microbial-rich habitats. To understand the molecular mechanism by which termites combat pathogenic microbes, a full-length normalized cDNA library and four Suppression Subtractive Hybridization (SSH) libraries were cons...

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Autores principales: Hussain, Abid, Li, Yi-Feng, Cheng, Yu, Liu, Yang, Chen, Chuan-Cheng, Wen, Shuo-Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3712931/
https://www.ncbi.nlm.nih.gov/pubmed/23874972
http://dx.doi.org/10.1371/journal.pone.0069543
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author Hussain, Abid
Li, Yi-Feng
Cheng, Yu
Liu, Yang
Chen, Chuan-Cheng
Wen, Shuo-Yang
author_facet Hussain, Abid
Li, Yi-Feng
Cheng, Yu
Liu, Yang
Chen, Chuan-Cheng
Wen, Shuo-Yang
author_sort Hussain, Abid
collection PubMed
description Formosan subterranean termites, Coptotermes formosanus Shiraki, live socially in microbial-rich habitats. To understand the molecular mechanism by which termites combat pathogenic microbes, a full-length normalized cDNA library and four Suppression Subtractive Hybridization (SSH) libraries were constructed from termite workers infected with entomopathogenic fungi (Metarhizium anisopliae and Beauveria bassiana), Gram-positive Bacillus thuringiensis and Gram-negative Escherichia coli, and the libraries were analyzed. From the high quality normalized cDNA library, 439 immune-related sequences were identified. These sequences were categorized as pattern recognition receptors (47 sequences), signal modulators (52 sequences), signal transducers (137 sequences), effectors (39 sequences) and others (164 sequences). From the SSH libraries, 27, 17, 22 and 15 immune-related genes were identified from each SSH library treated with M. anisopliae, B. bassiana, B. thuringiensis and E. coli, respectively. When the normalized cDNA library was compared with the SSH libraries, 37 immune-related clusters were found in common; 56 clusters were identified in the SSH libraries, and 259 were identified in the normalized cDNA library. The immune-related gene expression pattern was further investigated using quantitative real time PCR (qPCR). Important immune-related genes were characterized, and their potential functions were discussed based on the integrated analysis of the results. We suggest that normalized cDNA and SSH libraries enable us to discover functional genes transcriptome. The results remarkably expand our knowledge about immune-inducible genes in C. formosanus Shiraki and enable the future development of novel control strategies for the management of Formosan subterranean termites.
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spelling pubmed-37129312013-07-19 Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism Hussain, Abid Li, Yi-Feng Cheng, Yu Liu, Yang Chen, Chuan-Cheng Wen, Shuo-Yang PLoS One Research Article Formosan subterranean termites, Coptotermes formosanus Shiraki, live socially in microbial-rich habitats. To understand the molecular mechanism by which termites combat pathogenic microbes, a full-length normalized cDNA library and four Suppression Subtractive Hybridization (SSH) libraries were constructed from termite workers infected with entomopathogenic fungi (Metarhizium anisopliae and Beauveria bassiana), Gram-positive Bacillus thuringiensis and Gram-negative Escherichia coli, and the libraries were analyzed. From the high quality normalized cDNA library, 439 immune-related sequences were identified. These sequences were categorized as pattern recognition receptors (47 sequences), signal modulators (52 sequences), signal transducers (137 sequences), effectors (39 sequences) and others (164 sequences). From the SSH libraries, 27, 17, 22 and 15 immune-related genes were identified from each SSH library treated with M. anisopliae, B. bassiana, B. thuringiensis and E. coli, respectively. When the normalized cDNA library was compared with the SSH libraries, 37 immune-related clusters were found in common; 56 clusters were identified in the SSH libraries, and 259 were identified in the normalized cDNA library. The immune-related gene expression pattern was further investigated using quantitative real time PCR (qPCR). Important immune-related genes were characterized, and their potential functions were discussed based on the integrated analysis of the results. We suggest that normalized cDNA and SSH libraries enable us to discover functional genes transcriptome. The results remarkably expand our knowledge about immune-inducible genes in C. formosanus Shiraki and enable the future development of novel control strategies for the management of Formosan subterranean termites. Public Library of Science 2013-07-16 /pmc/articles/PMC3712931/ /pubmed/23874972 http://dx.doi.org/10.1371/journal.pone.0069543 Text en © 2013 Hussain et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Hussain, Abid
Li, Yi-Feng
Cheng, Yu
Liu, Yang
Chen, Chuan-Cheng
Wen, Shuo-Yang
Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism
title Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism
title_full Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism
title_fullStr Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism
title_full_unstemmed Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism
title_short Immune-Related Transcriptome of Coptotermes formosanus Shiraki Workers: The Defense Mechanism
title_sort immune-related transcriptome of coptotermes formosanus shiraki workers: the defense mechanism
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3712931/
https://www.ncbi.nlm.nih.gov/pubmed/23874972
http://dx.doi.org/10.1371/journal.pone.0069543
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