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Exploring the limits of community detection strategies in complex networks

The characterization of network community structure has profound implications in several scientific areas. Therefore, testing the algorithms developed to establish the optimal division of a network into communities is a fundamental problem in the field. We performed here a highly detailed evaluation...

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Detalles Bibliográficos
Autores principales: Aldecoa, Rodrigo, Marín, Ignacio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3713530/
https://www.ncbi.nlm.nih.gov/pubmed/23860510
http://dx.doi.org/10.1038/srep02216
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author Aldecoa, Rodrigo
Marín, Ignacio
author_facet Aldecoa, Rodrigo
Marín, Ignacio
author_sort Aldecoa, Rodrigo
collection PubMed
description The characterization of network community structure has profound implications in several scientific areas. Therefore, testing the algorithms developed to establish the optimal division of a network into communities is a fundamental problem in the field. We performed here a highly detailed evaluation of community detection algorithms, which has two main novelties: 1) using complex closed benchmarks, which provide precise ways to assess whether the solutions generated by the algorithms are optimal; and, 2) A novel type of analysis, based on hierarchically clustering the solutions suggested by multiple community detection algorithms, which allows to easily visualize how different are those solutions. Surprise, a global parameter that evaluates the quality of a partition, confirms the power of these analyses. We show that none of the community detection algorithms tested provide consistently optimal results in all networks and that Surprise maximization, obtained by combining multiple algorithms, obtains quasi-optimal performances in these difficult benchmarks.
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spelling pubmed-37135302013-07-17 Exploring the limits of community detection strategies in complex networks Aldecoa, Rodrigo Marín, Ignacio Sci Rep Article The characterization of network community structure has profound implications in several scientific areas. Therefore, testing the algorithms developed to establish the optimal division of a network into communities is a fundamental problem in the field. We performed here a highly detailed evaluation of community detection algorithms, which has two main novelties: 1) using complex closed benchmarks, which provide precise ways to assess whether the solutions generated by the algorithms are optimal; and, 2) A novel type of analysis, based on hierarchically clustering the solutions suggested by multiple community detection algorithms, which allows to easily visualize how different are those solutions. Surprise, a global parameter that evaluates the quality of a partition, confirms the power of these analyses. We show that none of the community detection algorithms tested provide consistently optimal results in all networks and that Surprise maximization, obtained by combining multiple algorithms, obtains quasi-optimal performances in these difficult benchmarks. Nature Publishing Group 2013-07-17 /pmc/articles/PMC3713530/ /pubmed/23860510 http://dx.doi.org/10.1038/srep02216 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Aldecoa, Rodrigo
Marín, Ignacio
Exploring the limits of community detection strategies in complex networks
title Exploring the limits of community detection strategies in complex networks
title_full Exploring the limits of community detection strategies in complex networks
title_fullStr Exploring the limits of community detection strategies in complex networks
title_full_unstemmed Exploring the limits of community detection strategies in complex networks
title_short Exploring the limits of community detection strategies in complex networks
title_sort exploring the limits of community detection strategies in complex networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3713530/
https://www.ncbi.nlm.nih.gov/pubmed/23860510
http://dx.doi.org/10.1038/srep02216
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