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The Rat Genome Database 2013—data, tools and users
The Rat Genome Database (RGD) was started >10 years ago to provide a core genomic resource for rat researchers. Currently, RGD combines genetic, genomic, pathway, phenotype and strain information with a focus on disease. RGD users are provided with access to structured and curated data from the m...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3713714/ https://www.ncbi.nlm.nih.gov/pubmed/23434633 http://dx.doi.org/10.1093/bib/bbt007 |
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author | Laulederkind, Stanley J. F. Hayman, G. Thomas Wang, Shur-Jen Smith, Jennifer R. Lowry, Timothy F. Nigam, Rajni Petri, Victoria de Pons, Jeff Dwinell, Melinda R. Shimoyama, Mary Munzenmaier, Diane H. Worthey, Elizabeth A. Jacob, Howard J. |
author_facet | Laulederkind, Stanley J. F. Hayman, G. Thomas Wang, Shur-Jen Smith, Jennifer R. Lowry, Timothy F. Nigam, Rajni Petri, Victoria de Pons, Jeff Dwinell, Melinda R. Shimoyama, Mary Munzenmaier, Diane H. Worthey, Elizabeth A. Jacob, Howard J. |
author_sort | Laulederkind, Stanley J. F. |
collection | PubMed |
description | The Rat Genome Database (RGD) was started >10 years ago to provide a core genomic resource for rat researchers. Currently, RGD combines genetic, genomic, pathway, phenotype and strain information with a focus on disease. RGD users are provided with access to structured and curated data from the molecular level through the organismal level. Those users access RGD from all over the world. End users are not only rat researchers but also researchers working with mouse and human data. Translational research is supported by RGD’s comparative genetics/genomics data in disease portals, in GBrowse, in VCMap and on gene report pages. The impact of RGD also goes beyond the traditional biomedical researcher, as the influence of RGD reaches bioinformaticians, tool developers and curators. Import of RGD data into other publicly available databases expands the influence of RGD to a larger set of end users than those who avail themselves of the RGD website. The value of RGD continues to grow as more types of data and more tools are added, while reaching more types of end users. |
format | Online Article Text |
id | pubmed-3713714 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-37137142013-07-17 The Rat Genome Database 2013—data, tools and users Laulederkind, Stanley J. F. Hayman, G. Thomas Wang, Shur-Jen Smith, Jennifer R. Lowry, Timothy F. Nigam, Rajni Petri, Victoria de Pons, Jeff Dwinell, Melinda R. Shimoyama, Mary Munzenmaier, Diane H. Worthey, Elizabeth A. Jacob, Howard J. Brief Bioinform Papers The Rat Genome Database (RGD) was started >10 years ago to provide a core genomic resource for rat researchers. Currently, RGD combines genetic, genomic, pathway, phenotype and strain information with a focus on disease. RGD users are provided with access to structured and curated data from the molecular level through the organismal level. Those users access RGD from all over the world. End users are not only rat researchers but also researchers working with mouse and human data. Translational research is supported by RGD’s comparative genetics/genomics data in disease portals, in GBrowse, in VCMap and on gene report pages. The impact of RGD also goes beyond the traditional biomedical researcher, as the influence of RGD reaches bioinformaticians, tool developers and curators. Import of RGD data into other publicly available databases expands the influence of RGD to a larger set of end users than those who avail themselves of the RGD website. The value of RGD continues to grow as more types of data and more tools are added, while reaching more types of end users. Oxford University Press 2013-07 2013-02-22 /pmc/articles/PMC3713714/ /pubmed/23434633 http://dx.doi.org/10.1093/bib/bbt007 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Papers Laulederkind, Stanley J. F. Hayman, G. Thomas Wang, Shur-Jen Smith, Jennifer R. Lowry, Timothy F. Nigam, Rajni Petri, Victoria de Pons, Jeff Dwinell, Melinda R. Shimoyama, Mary Munzenmaier, Diane H. Worthey, Elizabeth A. Jacob, Howard J. The Rat Genome Database 2013—data, tools and users |
title | The Rat Genome Database 2013—data, tools and users |
title_full | The Rat Genome Database 2013—data, tools and users |
title_fullStr | The Rat Genome Database 2013—data, tools and users |
title_full_unstemmed | The Rat Genome Database 2013—data, tools and users |
title_short | The Rat Genome Database 2013—data, tools and users |
title_sort | rat genome database 2013—data, tools and users |
topic | Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3713714/ https://www.ncbi.nlm.nih.gov/pubmed/23434633 http://dx.doi.org/10.1093/bib/bbt007 |
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