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Bioinformatics analysis of the gene expression profile in Bladder carcinoma

Bladder carcinoma, which has the ninth highest incidence among malignant tumors in the world, is a complex, multifactorial disease. The malignant transformation of bladder cells results from DNA mutations and alterations in gene expression levels. In this work, we used a bioinformatics approach to i...

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Detalles Bibliográficos
Autores principales: Xiao, Jing, Yiqing, Qiu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3715297/
https://www.ncbi.nlm.nih.gov/pubmed/23885213
http://dx.doi.org/10.1590/S1415-47572013005000015
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author Xiao, Jing
Yiqing, Qiu
author_facet Xiao, Jing
Yiqing, Qiu
author_sort Xiao, Jing
collection PubMed
description Bladder carcinoma, which has the ninth highest incidence among malignant tumors in the world, is a complex, multifactorial disease. The malignant transformation of bladder cells results from DNA mutations and alterations in gene expression levels. In this work, we used a bioinformatics approach to investigate the molecular mechanisms of bladder carcinoma. Biochips downloaded from the Gene Expression Omnibus (GEO) were used to analyze the gene expression profile in urinary bladder cells from individuals with carcinoma. The gene expression profile of normal genomes was used as a control. The analysis of gene expression revealed important alterations in genes involved in biological processes and metabolic pathways. We also identified some small molecules capable of reversing the altered gene expression in bladder carcinoma; these molecules could provide a basis for future therapies for the treatment of this disease.
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spelling pubmed-37152972013-07-24 Bioinformatics analysis of the gene expression profile in Bladder carcinoma Xiao, Jing Yiqing, Qiu Genet Mol Biol Genomics and Bioinformatics Bladder carcinoma, which has the ninth highest incidence among malignant tumors in the world, is a complex, multifactorial disease. The malignant transformation of bladder cells results from DNA mutations and alterations in gene expression levels. In this work, we used a bioinformatics approach to investigate the molecular mechanisms of bladder carcinoma. Biochips downloaded from the Gene Expression Omnibus (GEO) were used to analyze the gene expression profile in urinary bladder cells from individuals with carcinoma. The gene expression profile of normal genomes was used as a control. The analysis of gene expression revealed important alterations in genes involved in biological processes and metabolic pathways. We also identified some small molecules capable of reversing the altered gene expression in bladder carcinoma; these molecules could provide a basis for future therapies for the treatment of this disease. Sociedade Brasileira de Genética 2013-07 2013-04-12 /pmc/articles/PMC3715297/ /pubmed/23885213 http://dx.doi.org/10.1590/S1415-47572013005000015 Text en Copyright © 2013, Sociedade Brasileira de Genética. License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genomics and Bioinformatics
Xiao, Jing
Yiqing, Qiu
Bioinformatics analysis of the gene expression profile in Bladder carcinoma
title Bioinformatics analysis of the gene expression profile in Bladder carcinoma
title_full Bioinformatics analysis of the gene expression profile in Bladder carcinoma
title_fullStr Bioinformatics analysis of the gene expression profile in Bladder carcinoma
title_full_unstemmed Bioinformatics analysis of the gene expression profile in Bladder carcinoma
title_short Bioinformatics analysis of the gene expression profile in Bladder carcinoma
title_sort bioinformatics analysis of the gene expression profile in bladder carcinoma
topic Genomics and Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3715297/
https://www.ncbi.nlm.nih.gov/pubmed/23885213
http://dx.doi.org/10.1590/S1415-47572013005000015
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