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Real-time bioacoustics monitoring and automated species identification

Traditionally, animal species diversity and abundance is assessed using a variety of methods that are generally costly, limited in space and time, and most importantly, they rarely include a permanent record. Given the urgency of climate change and the loss of habitat, it is vital that we use new te...

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Autores principales: Aide, T. Mitchell, Corrada-Bravo, Carlos, Campos-Cerqueira, Marconi, Milan, Carlos, Vega, Giovany, Alvarez, Rafael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3719130/
https://www.ncbi.nlm.nih.gov/pubmed/23882441
http://dx.doi.org/10.7717/peerj.103
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author Aide, T. Mitchell
Corrada-Bravo, Carlos
Campos-Cerqueira, Marconi
Milan, Carlos
Vega, Giovany
Alvarez, Rafael
author_facet Aide, T. Mitchell
Corrada-Bravo, Carlos
Campos-Cerqueira, Marconi
Milan, Carlos
Vega, Giovany
Alvarez, Rafael
author_sort Aide, T. Mitchell
collection PubMed
description Traditionally, animal species diversity and abundance is assessed using a variety of methods that are generally costly, limited in space and time, and most importantly, they rarely include a permanent record. Given the urgency of climate change and the loss of habitat, it is vital that we use new technologies to improve and expand global biodiversity monitoring to thousands of sites around the world. In this article, we describe the acoustical component of the Automated Remote Biodiversity Monitoring Network (ARBIMON), a novel combination of hardware and software for automating data acquisition, data management, and species identification based on audio recordings. The major components of the cyberinfrastructure include: a solar powered remote monitoring station that sends 1-min recordings every 10 min to a base station, which relays the recordings in real-time to the project server, where the recordings are processed and uploaded to the project website (arbimon.net). Along with a module for viewing, listening, and annotating recordings, the website includes a species identification interface to help users create machine learning algorithms to automate species identification. To demonstrate the system we present data on the vocal activity patterns of birds, frogs, insects, and mammals from Puerto Rico and Costa Rica.
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spelling pubmed-37191302013-07-23 Real-time bioacoustics monitoring and automated species identification Aide, T. Mitchell Corrada-Bravo, Carlos Campos-Cerqueira, Marconi Milan, Carlos Vega, Giovany Alvarez, Rafael PeerJ Animal Behavior Traditionally, animal species diversity and abundance is assessed using a variety of methods that are generally costly, limited in space and time, and most importantly, they rarely include a permanent record. Given the urgency of climate change and the loss of habitat, it is vital that we use new technologies to improve and expand global biodiversity monitoring to thousands of sites around the world. In this article, we describe the acoustical component of the Automated Remote Biodiversity Monitoring Network (ARBIMON), a novel combination of hardware and software for automating data acquisition, data management, and species identification based on audio recordings. The major components of the cyberinfrastructure include: a solar powered remote monitoring station that sends 1-min recordings every 10 min to a base station, which relays the recordings in real-time to the project server, where the recordings are processed and uploaded to the project website (arbimon.net). Along with a module for viewing, listening, and annotating recordings, the website includes a species identification interface to help users create machine learning algorithms to automate species identification. To demonstrate the system we present data on the vocal activity patterns of birds, frogs, insects, and mammals from Puerto Rico and Costa Rica. PeerJ Inc. 2013-07-16 /pmc/articles/PMC3719130/ /pubmed/23882441 http://dx.doi.org/10.7717/peerj.103 Text en © 2013 Aide et al. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Animal Behavior
Aide, T. Mitchell
Corrada-Bravo, Carlos
Campos-Cerqueira, Marconi
Milan, Carlos
Vega, Giovany
Alvarez, Rafael
Real-time bioacoustics monitoring and automated species identification
title Real-time bioacoustics monitoring and automated species identification
title_full Real-time bioacoustics monitoring and automated species identification
title_fullStr Real-time bioacoustics monitoring and automated species identification
title_full_unstemmed Real-time bioacoustics monitoring and automated species identification
title_short Real-time bioacoustics monitoring and automated species identification
title_sort real-time bioacoustics monitoring and automated species identification
topic Animal Behavior
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3719130/
https://www.ncbi.nlm.nih.gov/pubmed/23882441
http://dx.doi.org/10.7717/peerj.103
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