Cargando…

Analysis of copy number variants by three detection algorithms and their association with body size in horses

BACKGROUND: Copy number variants (CNVs) have been shown to play an important role in genetic diversity of mammals and in the development of many complex phenotypic traits. The aim of this study was to perform a standard comparative evaluation of CNVs in horses using three different CNV detection pro...

Descripción completa

Detalles Bibliográficos
Autores principales:	Metzger, Julia, Philipp, Ute, Lopes, Maria Susana, da Camara Machado, Artur, Felicetti, Michela, Silvestrelli, Maurizio, Distl, Ottmar
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3720552/ https://www.ncbi.nlm.nih.gov/pubmed/23865711 http://dx.doi.org/10.1186/1471-2164-14-487

Ejemplares similares

Expression Levels of LCORL Are Associated with Body Size in Horses
por: Metzger, Julia, et al.
Publicado: (2013)

Genome data uncover four synergistic key regulators for extremely small body size in horses
por: Metzger, Julia, et al.
Publicado: (2018)

Exercise-induced up-regulation of MMP-1 and IL-8 genes in endurance horses
por: Cappelli, Katia, et al.
Publicado: (2009)

Genome-Wide Linkage and Association Analysis Identifies Major Gene Loci for Guttural Pouch Tympany in Arabian and German Warmblood Horses
por: Metzger, Julia, et al.
Publicado: (2012)

Exercise induced stress in horses: Selection of the most stable reference genes for quantitative RT-PCR normalization
por: Cappelli, Katia, et al.
Publicado: (2008)

Identification of copy number variants in horses
por: Doan, Ryan, et al.
Publicado: (2012)

Demographic assessment of the Dalmatian dog – effective population size, linkage disequilibrium and inbreeding coefficients
por: Vasiliadis, Danae, et al.
Publicado: (2020)

SNP-Based Heritability of Osteochondrosis Dissecans in Hanoverian Warmblood Horses
por: Zimmermann, Elisa, et al.
Publicado: (2023)

Prevalence of Chronic Progressive Lymphedema in the Rhenish German Draught Horse
por: Sievers, Johanna, et al.
Publicado: (2023)

A Genome-Wide Association Study Identifies Risk Loci to Equine Recurrent Uveitis in German Warmblood Horses
por: Kulbrock, Maike, et al.
Publicado: (2013)

Historic Horse Family Displaying Malformations of the Cervicothoracic Junction and Their Connection to Modern German Warmblood Horses
por: Zimmermann, Elisa, et al.
Publicado: (2023)

An FGA Frameshift Variant Associated with Afibrinogenemia in Dachshunds
por: Mischke, Reinhard, et al.
Publicado: (2021)

Next generation sequencing gives an insight into the characteristics of highly selected breeds versus non-breed horses in the course of domestication
por: Metzger, Julia, et al.
Publicado: (2014)

Genetic correlations between conformation traits and radiographic findings in the limbs of German Warmblood riding horses
por: Stock, Kathrin Friederike, et al.
Publicado: (2006)

Copy Number Variation in the Horse Genome
por: Ghosh, Sharmila, et al.
Publicado: (2014)

Variant detection and runs of homozygosity in next generation sequencing data elucidate the genetic background of Lundehund syndrome
por: Metzger, Julia, et al.
Publicado: (2016)

Genetic Diversity in the Modern Horse Illustrated from Genome-Wide SNP Data
por: Petersen, Jessica L., et al.
Publicado: (2013)

An epistatic effect of KRT25 on SP6 is involved in curly coat in horses
por: Thomer, Annika, et al.
Publicado: (2018)

Effects of inbreeding and other systematic effects on fertility of Black Forest Draught horses in Germany
por: Müller-Unterberg, Maarit, et al.
Publicado: (2017)

Runs of homozygosity reveal signatures of positive selection for reproduction traits in breed and non-breed horses
por: Metzger, Julia, et al.
Publicado: (2015)

The Effect of Algorithms on Copy Number Variant Detection
por: Tsuang, Debby W., et al.
Publicado: (2010)

Effective Population Size, Extended Linkage Disequilibrium and Signatures of Selection in the Rare Dog Breed Lundehund
por: Pfahler, Sophia, et al.
Publicado: (2015)

Bayesian estimation of genetic parameters for multivariate threshold and continuous phenotypes and molecular genetic data in simulated horse populations using Gibbs sampling
por: Stock, Kathrin F, et al.
Publicado: (2007)

Morphometric magnetic resonance imaging and genetic testing in cerebellar abiotrophy in Arabian horses
por: Cavalleri, Jessika MV, et al.
Publicado: (2013)

Tracing selection signatures in the pig genome gives evidence for selective pressures on a unique curly hair phenotype in Mangalitza
por: Schachler, Kathrin, et al.
Publicado: (2020)

Multiple Loci Are Associated with Dilated Cardiomyopathy in Irish Wolfhounds
por: Philipp, Ute, et al.
Publicado: (2012)

Unlocking Horse Y Chromosome Diversity
por: Cardinali, Irene, et al.
Publicado: (2022)

Copy number variation of horse Y chromosome genes in normal equine populations and in horses with abnormal sex development and subfertility: relationship of copy number variations with Y haplogroups
por: Castaneda, Caitlin, et al.
Publicado: (2022)

Screening of whole genome sequences identified high-impact variants for stallion fertility
por: Schrimpf, Rahel, et al.
Publicado: (2016)

Genome-Wide Association Study Identifies Phospholipase C zeta 1 (PLCz1) as a Stallion Fertility Locus in Hanoverian Warmblood Horses
por: Schrimpf, Rahel, et al.
Publicado: (2014)

Copy Number Variation (CNV): A New Genomic Insight in Horses
por: Laseca, Nora, et al.
Publicado: (2022)

Genome-wide association study for hereditary ataxia in the Parson Russell Terrier and DNA-testing for ataxia-associated mutations in the Parson and Jack Russell Terrier
por: Gast, Alana Christina, et al.
Publicado: (2016)

Complexity and algorithms for copy-number evolution problems
por: El-Kebir, Mohammed, et al.
Publicado: (2017)

Identification of Copy Number Variations in Four Horse Breed Populations in South Korea
por: Kim, Yong-Min, et al.
Publicado: (2022)

Genome-Wide Detection of Copy Number Variations Associated with Miniature Features in Horses
por: Choudhury, Md. Panir, et al.
Publicado: (2023)

De novo ZIC2 frameshift variant associated with frontonasal dysplasia in a Limousin calf
por: Braun, Marina, et al.
Publicado: (2021)

A Single Nucleotide Polymorphism within the Interferon Gamma Receptor 2 Gene Perfectly Coincides with Polledness in Holstein Cattle
por: Glatzer, Sabrina, et al.
Publicado: (2013)

Y-Chromosome Haplotype Report among Eight Italian Horse Breeds
por: Giontella, Andrea, et al.
Publicado: (2023)

A One Base Pair Deletion in the Canine ATP13A2 Gene Causes Exon Skipping and Late-Onset Neuronal Ceroid Lipofuscinosis in the Tibetan Terrier
por: Wöhlke, Anne, et al.
Publicado: (2011)

Copy number expansion of the STX17 duplication in melanoma tissue from Grey horses
por: Sundström, Elisabeth, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_dvfqcmguqh7d07umkm474f4e4k