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Fast and accurate automated cell boundary determination for fluorescence microscopy
Detailed measurement of cell phenotype information from digital fluorescence images has the potential to greatly advance biomedicine in various disciplines such as patient diagnostics or drug screening. Yet, the complexity of cell conformations presents a major barrier preventing effective determina...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3721074/ https://www.ncbi.nlm.nih.gov/pubmed/23881180 http://dx.doi.org/10.1038/srep02266 |
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author | Arce, Stephen Hugo Wu, Pei-Hsun Tseng, Yiider |
author_facet | Arce, Stephen Hugo Wu, Pei-Hsun Tseng, Yiider |
author_sort | Arce, Stephen Hugo |
collection | PubMed |
description | Detailed measurement of cell phenotype information from digital fluorescence images has the potential to greatly advance biomedicine in various disciplines such as patient diagnostics or drug screening. Yet, the complexity of cell conformations presents a major barrier preventing effective determination of cell boundaries, and introduces measurement error that propagates throughout subsequent assessment of cellular parameters and statistical analysis. State-of-the-art image segmentation techniques that require user-interaction, prolonged computation time and specialized training cannot adequately provide the support for high content platforms, which often sacrifice resolution to foster the speedy collection of massive amounts of cellular data. This work introduces a strategy that allows us to rapidly obtain accurate cell boundaries from digital fluorescent images in an automated format. Hence, this new method has broad applicability to promote biotechnology. |
format | Online Article Text |
id | pubmed-3721074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-37210742013-07-24 Fast and accurate automated cell boundary determination for fluorescence microscopy Arce, Stephen Hugo Wu, Pei-Hsun Tseng, Yiider Sci Rep Article Detailed measurement of cell phenotype information from digital fluorescence images has the potential to greatly advance biomedicine in various disciplines such as patient diagnostics or drug screening. Yet, the complexity of cell conformations presents a major barrier preventing effective determination of cell boundaries, and introduces measurement error that propagates throughout subsequent assessment of cellular parameters and statistical analysis. State-of-the-art image segmentation techniques that require user-interaction, prolonged computation time and specialized training cannot adequately provide the support for high content platforms, which often sacrifice resolution to foster the speedy collection of massive amounts of cellular data. This work introduces a strategy that allows us to rapidly obtain accurate cell boundaries from digital fluorescent images in an automated format. Hence, this new method has broad applicability to promote biotechnology. Nature Publishing Group 2013-07-24 /pmc/articles/PMC3721074/ /pubmed/23881180 http://dx.doi.org/10.1038/srep02266 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Arce, Stephen Hugo Wu, Pei-Hsun Tseng, Yiider Fast and accurate automated cell boundary determination for fluorescence microscopy |
title | Fast and accurate automated cell boundary determination for fluorescence microscopy |
title_full | Fast and accurate automated cell boundary determination for fluorescence microscopy |
title_fullStr | Fast and accurate automated cell boundary determination for fluorescence microscopy |
title_full_unstemmed | Fast and accurate automated cell boundary determination for fluorescence microscopy |
title_short | Fast and accurate automated cell boundary determination for fluorescence microscopy |
title_sort | fast and accurate automated cell boundary determination for fluorescence microscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3721074/ https://www.ncbi.nlm.nih.gov/pubmed/23881180 http://dx.doi.org/10.1038/srep02266 |
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