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Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2

High-density mapping of mammalian genomes has enabled a wide range of genetic investigations including the mapping of polygenic traits, determination of quantitative trait loci, and phylogenetic comparison. Genome sequencing analysis of inbred mouse strains has identified high-density single nucleot...

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Autor principal: Cho, Hye-Youn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3723247/
https://www.ncbi.nlm.nih.gov/pubmed/23936606
http://dx.doi.org/10.1155/2013/286524
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author Cho, Hye-Youn
author_facet Cho, Hye-Youn
author_sort Cho, Hye-Youn
collection PubMed
description High-density mapping of mammalian genomes has enabled a wide range of genetic investigations including the mapping of polygenic traits, determination of quantitative trait loci, and phylogenetic comparison. Genome sequencing analysis of inbred mouse strains has identified high-density single nucleotide polymorphisms (SNPs) for investigation of complex traits, which has become a useful tool for biomedical research of human disease to alleviate ethical and practical problems of experimentation in humans. Nuclear factor (erythroid-derived 2)-like 2 (NRF2) encodes a key host defense transcription factor. This review describes genetic characteristics of human NRF2 and its homologs in other vertebrate species. NRF2 is evolutionally conserved and shares sequence homology among species. Compilation of publically available SNPs and other genetic mutations shows that human NRF2 is highly polymorphic with a mutagenic frequency of 1 per every 72 bp. Functional at-risk alleles and haplotypes have been demonstrated in various human disorders. In addition, other pathogenic alterations including somatic mutations and misregulated epigenetic processes in NRF2 have led to oncogenic cell survival. Comprehensive information from the current review addresses association of NRF2 variation and disease phenotypes and supports the new insights into therapeutic strategies.
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spelling pubmed-37232472013-08-09 Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2 Cho, Hye-Youn Oxid Med Cell Longev Review Article High-density mapping of mammalian genomes has enabled a wide range of genetic investigations including the mapping of polygenic traits, determination of quantitative trait loci, and phylogenetic comparison. Genome sequencing analysis of inbred mouse strains has identified high-density single nucleotide polymorphisms (SNPs) for investigation of complex traits, which has become a useful tool for biomedical research of human disease to alleviate ethical and practical problems of experimentation in humans. Nuclear factor (erythroid-derived 2)-like 2 (NRF2) encodes a key host defense transcription factor. This review describes genetic characteristics of human NRF2 and its homologs in other vertebrate species. NRF2 is evolutionally conserved and shares sequence homology among species. Compilation of publically available SNPs and other genetic mutations shows that human NRF2 is highly polymorphic with a mutagenic frequency of 1 per every 72 bp. Functional at-risk alleles and haplotypes have been demonstrated in various human disorders. In addition, other pathogenic alterations including somatic mutations and misregulated epigenetic processes in NRF2 have led to oncogenic cell survival. Comprehensive information from the current review addresses association of NRF2 variation and disease phenotypes and supports the new insights into therapeutic strategies. Hindawi Publishing Corporation 2013 2013-07-10 /pmc/articles/PMC3723247/ /pubmed/23936606 http://dx.doi.org/10.1155/2013/286524 Text en Copyright © 2013 Hye-Youn Cho. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Cho, Hye-Youn
Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2
title Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2
title_full Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2
title_fullStr Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2
title_full_unstemmed Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2
title_short Genomic Structure and Variation of Nuclear Factor (Erythroid-Derived 2)-Like 2
title_sort genomic structure and variation of nuclear factor (erythroid-derived 2)-like 2
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3723247/
https://www.ncbi.nlm.nih.gov/pubmed/23936606
http://dx.doi.org/10.1155/2013/286524
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