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Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk
BACKGROUND: Maps of disease occurrences and GIS-based models of disease transmission risk are increasingly common, and both rely on georeferenced diseases data. Automated methods for georeferencing disease data have been widely studied for developed countries with rich sources of geographic referenc...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3724478/ https://www.ncbi.nlm.nih.gov/pubmed/22738820 http://dx.doi.org/10.1186/1476-072X-11-23 |
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author | Lash, R Ryan Carroll, Darin S Hughes, Christine M Nakazawa, Yoshinori Karem, Kevin Damon, Inger K Peterson, A Townsend |
author_facet | Lash, R Ryan Carroll, Darin S Hughes, Christine M Nakazawa, Yoshinori Karem, Kevin Damon, Inger K Peterson, A Townsend |
author_sort | Lash, R Ryan |
collection | PubMed |
description | BACKGROUND: Maps of disease occurrences and GIS-based models of disease transmission risk are increasingly common, and both rely on georeferenced diseases data. Automated methods for georeferencing disease data have been widely studied for developed countries with rich sources of geographic referenced data. However, the transferability of these methods to countries without comparable geographic reference data, particularly when working with historical disease data, has not been as widely studied. Historically, precise geographic information about where individual cases occur has been collected and stored verbally, identifying specific locations using place names. Georeferencing historic data is challenging however, because it is difficult to find appropriate geographic reference data to match the place names to. Here, we assess the degree of care and research invested in converting textual descriptions of disease occurrence locations to numerical grid coordinates (latitude and longitude). Specifically, we develop three datasets from the same, original monkeypox disease occurrence data, with varying levels of care and effort: the first based on an automated web-service, the second improving on the first by reference to additional maps and digital gazetteers, and the third improving still more based on extensive consultation of legacy surveillance records that provided considerable additional information about each case. To illustrate the implications of these seemingly subtle improvements in data quality, we develop ecological niche models and predictive maps of monkeypox transmission risk based on each of the three occurrence data sets. RESULTS: We found macrogeographic variations in ecological niche models depending on the type of georeferencing method used. Less-careful georeferencing identified much smaller areas as having potential for monkeypox transmission in the Sahel region, as well as around the rim of the Congo Basin. These results have implications for mapping efforts, as each higher level of georeferencing precision required considerably greater time investment. CONCLUSIONS: The importance of careful georeferencing cannot be overlooked, despite it being a time- and labor-intensive process. Investment in archival storage of primary disease-occurrence data is merited, and improved digital gazetteers are needed to support public health mapping activities, particularly in developing countries, where maps and geographic information may be sparse. |
format | Online Article Text |
id | pubmed-3724478 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-37244782013-07-27 Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk Lash, R Ryan Carroll, Darin S Hughes, Christine M Nakazawa, Yoshinori Karem, Kevin Damon, Inger K Peterson, A Townsend Int J Health Geogr Methodology BACKGROUND: Maps of disease occurrences and GIS-based models of disease transmission risk are increasingly common, and both rely on georeferenced diseases data. Automated methods for georeferencing disease data have been widely studied for developed countries with rich sources of geographic referenced data. However, the transferability of these methods to countries without comparable geographic reference data, particularly when working with historical disease data, has not been as widely studied. Historically, precise geographic information about where individual cases occur has been collected and stored verbally, identifying specific locations using place names. Georeferencing historic data is challenging however, because it is difficult to find appropriate geographic reference data to match the place names to. Here, we assess the degree of care and research invested in converting textual descriptions of disease occurrence locations to numerical grid coordinates (latitude and longitude). Specifically, we develop three datasets from the same, original monkeypox disease occurrence data, with varying levels of care and effort: the first based on an automated web-service, the second improving on the first by reference to additional maps and digital gazetteers, and the third improving still more based on extensive consultation of legacy surveillance records that provided considerable additional information about each case. To illustrate the implications of these seemingly subtle improvements in data quality, we develop ecological niche models and predictive maps of monkeypox transmission risk based on each of the three occurrence data sets. RESULTS: We found macrogeographic variations in ecological niche models depending on the type of georeferencing method used. Less-careful georeferencing identified much smaller areas as having potential for monkeypox transmission in the Sahel region, as well as around the rim of the Congo Basin. These results have implications for mapping efforts, as each higher level of georeferencing precision required considerably greater time investment. CONCLUSIONS: The importance of careful georeferencing cannot be overlooked, despite it being a time- and labor-intensive process. Investment in archival storage of primary disease-occurrence data is merited, and improved digital gazetteers are needed to support public health mapping activities, particularly in developing countries, where maps and geographic information may be sparse. BioMed Central 2012-06-27 /pmc/articles/PMC3724478/ /pubmed/22738820 http://dx.doi.org/10.1186/1476-072X-11-23 Text en Copyright © 2012 Lash et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methodology Lash, R Ryan Carroll, Darin S Hughes, Christine M Nakazawa, Yoshinori Karem, Kevin Damon, Inger K Peterson, A Townsend Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
title | Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
title_full | Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
title_fullStr | Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
title_full_unstemmed | Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
title_short | Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
title_sort | effects of georeferencing effort on mapping monkeypox case distributions and transmission risk |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3724478/ https://www.ncbi.nlm.nih.gov/pubmed/22738820 http://dx.doi.org/10.1186/1476-072X-11-23 |
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