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Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics
Coordinate based meta-analysis (CBMA) is widely used to find regions of consistent activation across fMRI studies that have been selected for their functional relevance to a given hypothesis. Only reported coordinates (foci), and a model of their spatial uncertainty, are used in the analysis. Result...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726528/ https://www.ncbi.nlm.nih.gov/pubmed/23922941 http://dx.doi.org/10.1371/journal.pone.0070143 |
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author | Tench, Christopher R. Tanasescu, Radu Auer, Dorothee P. Constantinescu, Cris S. |
author_facet | Tench, Christopher R. Tanasescu, Radu Auer, Dorothee P. Constantinescu, Cris S. |
author_sort | Tench, Christopher R. |
collection | PubMed |
description | Coordinate based meta-analysis (CBMA) is widely used to find regions of consistent activation across fMRI studies that have been selected for their functional relevance to a given hypothesis. Only reported coordinates (foci), and a model of their spatial uncertainty, are used in the analysis. Results are clusters of foci where multiple studies have reported in the same spatial region, indicating functional relevance. There are several published methods that perform the analysis in a voxel-wise manner, resulting in around 10(5) statistical tests, and considerable emphasis placed on controlling the risk of type 1 statistical error. Here we address this issue by dramatically reducing the number of tests, and by introducing a new false discovery rate control: the false cluster discovery rate (FCDR). FCDR is particularly interpretable and relevant to the results of CBMA, controlling the type 1 error by limiting the proportion of clusters that are expected under the null hypothesis. We also introduce a data diagnostic scheme to help ensure quality of the analysis, and demonstrate its use in the example studies. We show that we control the false clusters better than the widely used ALE method by performing numerical experiments, and that our clustering scheme results in more complete reporting of structures relevant to the functional task. |
format | Online Article Text |
id | pubmed-3726528 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-37265282013-08-06 Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics Tench, Christopher R. Tanasescu, Radu Auer, Dorothee P. Constantinescu, Cris S. PLoS One Research Article Coordinate based meta-analysis (CBMA) is widely used to find regions of consistent activation across fMRI studies that have been selected for their functional relevance to a given hypothesis. Only reported coordinates (foci), and a model of their spatial uncertainty, are used in the analysis. Results are clusters of foci where multiple studies have reported in the same spatial region, indicating functional relevance. There are several published methods that perform the analysis in a voxel-wise manner, resulting in around 10(5) statistical tests, and considerable emphasis placed on controlling the risk of type 1 statistical error. Here we address this issue by dramatically reducing the number of tests, and by introducing a new false discovery rate control: the false cluster discovery rate (FCDR). FCDR is particularly interpretable and relevant to the results of CBMA, controlling the type 1 error by limiting the proportion of clusters that are expected under the null hypothesis. We also introduce a data diagnostic scheme to help ensure quality of the analysis, and demonstrate its use in the example studies. We show that we control the false clusters better than the widely used ALE method by performing numerical experiments, and that our clustering scheme results in more complete reporting of structures relevant to the functional task. Public Library of Science 2013-07-29 /pmc/articles/PMC3726528/ /pubmed/23922941 http://dx.doi.org/10.1371/journal.pone.0070143 Text en © 2013 Tench et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Tench, Christopher R. Tanasescu, Radu Auer, Dorothee P. Constantinescu, Cris S. Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics |
title | Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics |
title_full | Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics |
title_fullStr | Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics |
title_full_unstemmed | Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics |
title_short | Coordinate Based Meta-Analysis of Functional Neuroimaging Data; False Discovery Control and Diagnostics |
title_sort | coordinate based meta-analysis of functional neuroimaging data; false discovery control and diagnostics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726528/ https://www.ncbi.nlm.nih.gov/pubmed/23922941 http://dx.doi.org/10.1371/journal.pone.0070143 |
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