Cargando…

The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer

The assembly of double-stranded DNA bacteriophages is dependent on a small terminase protein that normally plays two important roles. Firstly, the small terminase protein specifically recognizes viral DNA and recruits the large terminase protein, which makes the initial cut in the dsDNA. Secondly, o...

Descripción completa

Detalles Bibliográficos
Autores principales: Loredo-Varela, Juan, Chechik, Maria, Levdikov, Vladimir M., Abd-El-Aziz, Ahmad, Minakhin, Leonid, Severinov, Konstantin, Smits, Callum, Antson, Alfred A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3729163/
https://www.ncbi.nlm.nih.gov/pubmed/23908032
http://dx.doi.org/10.1107/S1744309113017016
_version_ 1782278947072901120
author Loredo-Varela, Juan
Chechik, Maria
Levdikov, Vladimir M.
Abd-El-Aziz, Ahmad
Minakhin, Leonid
Severinov, Konstantin
Smits, Callum
Antson, Alfred A.
author_facet Loredo-Varela, Juan
Chechik, Maria
Levdikov, Vladimir M.
Abd-El-Aziz, Ahmad
Minakhin, Leonid
Severinov, Konstantin
Smits, Callum
Antson, Alfred A.
author_sort Loredo-Varela, Juan
collection PubMed
description The assembly of double-stranded DNA bacteriophages is dependent on a small terminase protein that normally plays two important roles. Firstly, the small terminase protein specifically recognizes viral DNA and recruits the large terminase protein, which makes the initial cut in the dsDNA. Secondly, once the complex of the small terminase, the large terminase and the DNA has docked to the portal protein, and DNA translocation into a preformed empty procapsid has begun, the small terminase modulates the ATPase activity of the large terminase. Here, the putative small terminase protein from the thermostable bacteriophage G20C, which infects the Gram-negative eubacterium Thermus thermophilus, has been produced, purified and crystallized. Size-exclusion chromatography–multi-angle laser light scattering data indicate that the protein forms oligomers containing nine subunits. Crystals diffracting to 2.8 Å resolution have been obtained. These belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 94.31, b = 125.6, c = 162.8 Å. The self-rotation function and Matthews coefficient calculations are consistent with the presence of a nine-subunit oligomer in the asymmetric unit.
format Online
Article
Text
id pubmed-3729163
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-37291632013-08-02 The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer Loredo-Varela, Juan Chechik, Maria Levdikov, Vladimir M. Abd-El-Aziz, Ahmad Minakhin, Leonid Severinov, Konstantin Smits, Callum Antson, Alfred A. Acta Crystallogr Sect F Struct Biol Cryst Commun Crystallization Communications The assembly of double-stranded DNA bacteriophages is dependent on a small terminase protein that normally plays two important roles. Firstly, the small terminase protein specifically recognizes viral DNA and recruits the large terminase protein, which makes the initial cut in the dsDNA. Secondly, once the complex of the small terminase, the large terminase and the DNA has docked to the portal protein, and DNA translocation into a preformed empty procapsid has begun, the small terminase modulates the ATPase activity of the large terminase. Here, the putative small terminase protein from the thermostable bacteriophage G20C, which infects the Gram-negative eubacterium Thermus thermophilus, has been produced, purified and crystallized. Size-exclusion chromatography–multi-angle laser light scattering data indicate that the protein forms oligomers containing nine subunits. Crystals diffracting to 2.8 Å resolution have been obtained. These belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 94.31, b = 125.6, c = 162.8 Å. The self-rotation function and Matthews coefficient calculations are consistent with the presence of a nine-subunit oligomer in the asymmetric unit. International Union of Crystallography 2013-07-27 /pmc/articles/PMC3729163/ /pubmed/23908032 http://dx.doi.org/10.1107/S1744309113017016 Text en © Loredo-Varela et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Crystallization Communications
Loredo-Varela, Juan
Chechik, Maria
Levdikov, Vladimir M.
Abd-El-Aziz, Ahmad
Minakhin, Leonid
Severinov, Konstantin
Smits, Callum
Antson, Alfred A.
The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
title The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
title_full The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
title_fullStr The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
title_full_unstemmed The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
title_short The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
title_sort putative small terminase from the thermophilic dsdna bacteriophage g20c is a nine-subunit oligomer
topic Crystallization Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3729163/
https://www.ncbi.nlm.nih.gov/pubmed/23908032
http://dx.doi.org/10.1107/S1744309113017016
work_keys_str_mv AT loredovarelajuan theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT chechikmaria theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT levdikovvladimirm theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT abdelazizahmad theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT minakhinleonid theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT severinovkonstantin theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT smitscallum theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT antsonalfreda theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT loredovarelajuan putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT chechikmaria putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT levdikovvladimirm putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT abdelazizahmad putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT minakhinleonid putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT severinovkonstantin putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT smitscallum putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer
AT antsonalfreda putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer