Cargando…
The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer
The assembly of double-stranded DNA bacteriophages is dependent on a small terminase protein that normally plays two important roles. Firstly, the small terminase protein specifically recognizes viral DNA and recruits the large terminase protein, which makes the initial cut in the dsDNA. Secondly, o...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3729163/ https://www.ncbi.nlm.nih.gov/pubmed/23908032 http://dx.doi.org/10.1107/S1744309113017016 |
_version_ | 1782278947072901120 |
---|---|
author | Loredo-Varela, Juan Chechik, Maria Levdikov, Vladimir M. Abd-El-Aziz, Ahmad Minakhin, Leonid Severinov, Konstantin Smits, Callum Antson, Alfred A. |
author_facet | Loredo-Varela, Juan Chechik, Maria Levdikov, Vladimir M. Abd-El-Aziz, Ahmad Minakhin, Leonid Severinov, Konstantin Smits, Callum Antson, Alfred A. |
author_sort | Loredo-Varela, Juan |
collection | PubMed |
description | The assembly of double-stranded DNA bacteriophages is dependent on a small terminase protein that normally plays two important roles. Firstly, the small terminase protein specifically recognizes viral DNA and recruits the large terminase protein, which makes the initial cut in the dsDNA. Secondly, once the complex of the small terminase, the large terminase and the DNA has docked to the portal protein, and DNA translocation into a preformed empty procapsid has begun, the small terminase modulates the ATPase activity of the large terminase. Here, the putative small terminase protein from the thermostable bacteriophage G20C, which infects the Gram-negative eubacterium Thermus thermophilus, has been produced, purified and crystallized. Size-exclusion chromatography–multi-angle laser light scattering data indicate that the protein forms oligomers containing nine subunits. Crystals diffracting to 2.8 Å resolution have been obtained. These belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 94.31, b = 125.6, c = 162.8 Å. The self-rotation function and Matthews coefficient calculations are consistent with the presence of a nine-subunit oligomer in the asymmetric unit. |
format | Online Article Text |
id | pubmed-3729163 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-37291632013-08-02 The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer Loredo-Varela, Juan Chechik, Maria Levdikov, Vladimir M. Abd-El-Aziz, Ahmad Minakhin, Leonid Severinov, Konstantin Smits, Callum Antson, Alfred A. Acta Crystallogr Sect F Struct Biol Cryst Commun Crystallization Communications The assembly of double-stranded DNA bacteriophages is dependent on a small terminase protein that normally plays two important roles. Firstly, the small terminase protein specifically recognizes viral DNA and recruits the large terminase protein, which makes the initial cut in the dsDNA. Secondly, once the complex of the small terminase, the large terminase and the DNA has docked to the portal protein, and DNA translocation into a preformed empty procapsid has begun, the small terminase modulates the ATPase activity of the large terminase. Here, the putative small terminase protein from the thermostable bacteriophage G20C, which infects the Gram-negative eubacterium Thermus thermophilus, has been produced, purified and crystallized. Size-exclusion chromatography–multi-angle laser light scattering data indicate that the protein forms oligomers containing nine subunits. Crystals diffracting to 2.8 Å resolution have been obtained. These belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 94.31, b = 125.6, c = 162.8 Å. The self-rotation function and Matthews coefficient calculations are consistent with the presence of a nine-subunit oligomer in the asymmetric unit. International Union of Crystallography 2013-07-27 /pmc/articles/PMC3729163/ /pubmed/23908032 http://dx.doi.org/10.1107/S1744309113017016 Text en © Loredo-Varela et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Crystallization Communications Loredo-Varela, Juan Chechik, Maria Levdikov, Vladimir M. Abd-El-Aziz, Ahmad Minakhin, Leonid Severinov, Konstantin Smits, Callum Antson, Alfred A. The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer |
title | The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer |
title_full | The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer |
title_fullStr | The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer |
title_full_unstemmed | The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer |
title_short | The putative small terminase from the thermophilic dsDNA bacteriophage G20C is a nine-subunit oligomer |
title_sort | putative small terminase from the thermophilic dsdna bacteriophage g20c is a nine-subunit oligomer |
topic | Crystallization Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3729163/ https://www.ncbi.nlm.nih.gov/pubmed/23908032 http://dx.doi.org/10.1107/S1744309113017016 |
work_keys_str_mv | AT loredovarelajuan theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT chechikmaria theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT levdikovvladimirm theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT abdelazizahmad theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT minakhinleonid theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT severinovkonstantin theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT smitscallum theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT antsonalfreda theputativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT loredovarelajuan putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT chechikmaria putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT levdikovvladimirm putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT abdelazizahmad putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT minakhinleonid putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT severinovkonstantin putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT smitscallum putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer AT antsonalfreda putativesmallterminasefromthethermophilicdsdnabacteriophageg20cisaninesubunitoligomer |