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Assessing De Novo transcriptome assembly metrics for consistency and utility

BACKGROUND: Transcriptome sequencing and assembly represent a great resource for the study of non-model species, and many metrics have been used to evaluate and compare these assemblies. Unfortunately, it is still unclear which of these metrics accurately reflect assembly quality. RESULTS: We simula...

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Detalles Bibliográficos
Autores principales: O’Neil, Shawn T, Emrich, Scott J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3733778/
https://www.ncbi.nlm.nih.gov/pubmed/23837739
http://dx.doi.org/10.1186/1471-2164-14-465