Cargando…
Assessing De Novo transcriptome assembly metrics for consistency and utility
BACKGROUND: Transcriptome sequencing and assembly represent a great resource for the study of non-model species, and many metrics have been used to evaluate and compare these assemblies. Unfortunately, it is still unclear which of these metrics accurately reflect assembly quality. RESULTS: We simula...
Autores principales: | O’Neil, Shawn T, Emrich, Scott J |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3733778/ https://www.ncbi.nlm.nih.gov/pubmed/23837739 http://dx.doi.org/10.1186/1471-2164-14-465 |
Ejemplares similares
-
Haplotype and minimum-chimerism consensus determination using short sequence data
por: O'Neil, Shawn T, et al.
Publicado: (2012) -
Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon
por: O'Neil, Shawn T, et al.
Publicado: (2010) -
Assembly, Assessment, and Availability of De novo Generated Eukaryotic Transcriptomes
por: Moreton, Joanna, et al.
Publicado: (2016) -
Metrics for Assessing Cytoskeletal Orientational Correlations and Consistency
por: Drew, Nancy K., et al.
Publicado: (2015) -
Utilization of Tissue Ploidy Level Variation in de Novo Transcriptome Assembly of Pinus sylvestris
por: Ojeda, Dario I., et al.
Publicado: (2019)