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Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico

Cellular systems are generally robust against fluctuations of intracellular parameters such as gene expression level. However, little is known about expression limits of genes required to halt cellular systems. In this study, using the fission yeast Schizosaccharomyces pombe, we developed a genetic...

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Autores principales: Moriya, Hisao, Chino, Ayako, Kapuy, Orsolya, Csikász-Nagy, Attila, Novák, Béla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Molecular Biology Organization 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3737731/
https://www.ncbi.nlm.nih.gov/pubmed/22146300
http://dx.doi.org/10.1038/msb.2011.91
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author Moriya, Hisao
Chino, Ayako
Kapuy, Orsolya
Csikász-Nagy, Attila
Novák, Béla
author_facet Moriya, Hisao
Chino, Ayako
Kapuy, Orsolya
Csikász-Nagy, Attila
Novák, Béla
author_sort Moriya, Hisao
collection PubMed
description Cellular systems are generally robust against fluctuations of intracellular parameters such as gene expression level. However, little is known about expression limits of genes required to halt cellular systems. In this study, using the fission yeast Schizosaccharomyces pombe, we developed a genetic ‘tug-of-war’ (gTOW) method to assess the overexpression limit of certain genes. Using gTOW, we determined copy number limits for 31 cell-cycle regulators; the limits varied from 1 to >100. Comparison with orthologs of the budding yeast Saccharomyces cerevisiae suggested the presence of a conserved fragile core in the eukaryotic cell cycle. Robustness profiles of networks regulating cytokinesis in both yeasts (septation-initiation network (SIN) and mitotic exit network (MEN)) were quite different, probably reflecting differences in their physiologic functions. Fragility in the regulation of GTPase spg1 was due to dosage imbalance against GTPase-activating protein (GAP) byr4. Using the gTOW data, we modified a mathematical model and successfully reproduced the robustness of the S. pombe cell cycle with the model.
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spelling pubmed-37377312013-08-08 Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico Moriya, Hisao Chino, Ayako Kapuy, Orsolya Csikász-Nagy, Attila Novák, Béla Mol Syst Biol Article Cellular systems are generally robust against fluctuations of intracellular parameters such as gene expression level. However, little is known about expression limits of genes required to halt cellular systems. In this study, using the fission yeast Schizosaccharomyces pombe, we developed a genetic ‘tug-of-war’ (gTOW) method to assess the overexpression limit of certain genes. Using gTOW, we determined copy number limits for 31 cell-cycle regulators; the limits varied from 1 to >100. Comparison with orthologs of the budding yeast Saccharomyces cerevisiae suggested the presence of a conserved fragile core in the eukaryotic cell cycle. Robustness profiles of networks regulating cytokinesis in both yeasts (septation-initiation network (SIN) and mitotic exit network (MEN)) were quite different, probably reflecting differences in their physiologic functions. Fragility in the regulation of GTPase spg1 was due to dosage imbalance against GTPase-activating protein (GAP) byr4. Using the gTOW data, we modified a mathematical model and successfully reproduced the robustness of the S. pombe cell cycle with the model. European Molecular Biology Organization 2011-12-06 /pmc/articles/PMC3737731/ /pubmed/22146300 http://dx.doi.org/10.1038/msb.2011.91 Text en Copyright © 2011, EMBO and Macmillan Publishers Limited https://creativecommons.org/licenses/by-nc-sa/3.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Noncommercial Share Alike 3.0 Unported License, which allows readers to alter, transform, or build upon the article and then distribute the resulting work under the same or similar license to this one. The work must be attributed back to the original author and commercial use is not permitted without specific permission.
spellingShingle Article
Moriya, Hisao
Chino, Ayako
Kapuy, Orsolya
Csikász-Nagy, Attila
Novák, Béla
Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
title Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
title_full Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
title_fullStr Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
title_full_unstemmed Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
title_short Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
title_sort overexpression limits of fission yeast cell-cycle regulators in vivo and in silico
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3737731/
https://www.ncbi.nlm.nih.gov/pubmed/22146300
http://dx.doi.org/10.1038/msb.2011.91
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