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Beyond Reasonable Doubt: Evolution from DNA Sequences

We demonstrate quantitatively that, as predicted by evolutionary theory, sequences of homologous proteins from different species converge as we go further and further back in time. The converse, a non-evolutionary model can be expressed as probabilities, and the test works for chloroplast, nuclear a...

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Detalles Bibliográficos
Autores principales: White, W. Timothy J., Zhong, Bojian, Penny, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3738579/
https://www.ncbi.nlm.nih.gov/pubmed/23950906
http://dx.doi.org/10.1371/journal.pone.0069924
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author White, W. Timothy J.
Zhong, Bojian
Penny, David
author_facet White, W. Timothy J.
Zhong, Bojian
Penny, David
author_sort White, W. Timothy J.
collection PubMed
description We demonstrate quantitatively that, as predicted by evolutionary theory, sequences of homologous proteins from different species converge as we go further and further back in time. The converse, a non-evolutionary model can be expressed as probabilities, and the test works for chloroplast, nuclear and mitochondrial sequences, as well as for sequences that diverged at different time depths. Even on our conservative test, the probability that chance could produce the observed levels of ancestral convergence for just one of the eight datasets of 51 proteins is ≈1×10(−19) and combined over 8 datasets is ≈1×10(−132). By comparison, there are about 10(80) protons in the universe, hence the probability that the sequences could have been produced by a process involving unrelated ancestral sequences is about 10(50) lower than picking, among all protons, the same proton at random twice in a row. A non-evolutionary control model shows no convergence, and only a small number of parameters are required to account for the observations. It is time that that researchers insisted that doubters put up testable alternatives to evolution.
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spelling pubmed-37385792013-08-15 Beyond Reasonable Doubt: Evolution from DNA Sequences White, W. Timothy J. Zhong, Bojian Penny, David PLoS One Research Article We demonstrate quantitatively that, as predicted by evolutionary theory, sequences of homologous proteins from different species converge as we go further and further back in time. The converse, a non-evolutionary model can be expressed as probabilities, and the test works for chloroplast, nuclear and mitochondrial sequences, as well as for sequences that diverged at different time depths. Even on our conservative test, the probability that chance could produce the observed levels of ancestral convergence for just one of the eight datasets of 51 proteins is ≈1×10(−19) and combined over 8 datasets is ≈1×10(−132). By comparison, there are about 10(80) protons in the universe, hence the probability that the sequences could have been produced by a process involving unrelated ancestral sequences is about 10(50) lower than picking, among all protons, the same proton at random twice in a row. A non-evolutionary control model shows no convergence, and only a small number of parameters are required to account for the observations. It is time that that researchers insisted that doubters put up testable alternatives to evolution. Public Library of Science 2013-08-08 /pmc/articles/PMC3738579/ /pubmed/23950906 http://dx.doi.org/10.1371/journal.pone.0069924 Text en © 2013 White et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
White, W. Timothy J.
Zhong, Bojian
Penny, David
Beyond Reasonable Doubt: Evolution from DNA Sequences
title Beyond Reasonable Doubt: Evolution from DNA Sequences
title_full Beyond Reasonable Doubt: Evolution from DNA Sequences
title_fullStr Beyond Reasonable Doubt: Evolution from DNA Sequences
title_full_unstemmed Beyond Reasonable Doubt: Evolution from DNA Sequences
title_short Beyond Reasonable Doubt: Evolution from DNA Sequences
title_sort beyond reasonable doubt: evolution from dna sequences
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3738579/
https://www.ncbi.nlm.nih.gov/pubmed/23950906
http://dx.doi.org/10.1371/journal.pone.0069924
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