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Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation

This study used pyrosequencing to determine the proportional distribution of CYP3A5*3 genotypes to further confirm the homogeneous phenomenon that is observed when recipients and donors in living donor liver transplantation (LDLT) have a different single nucleotide polymorphism (SNP) genotype. We en...

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Autores principales: Chiu, King-Wah, Nakano, Toshiaki, Chen, Kuang-Den, Lai, Chia-Yun, Hsu, Li-Wen, Chiu, Ho-Ching, Huang, Ching-Yin, Cheng, Yu-Fan, Goto, Shigeru, Chen, Chao-Long
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3738598/
https://www.ncbi.nlm.nih.gov/pubmed/23951129
http://dx.doi.org/10.1371/journal.pone.0071314
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author Chiu, King-Wah
Nakano, Toshiaki
Chen, Kuang-Den
Lai, Chia-Yun
Hsu, Li-Wen
Chiu, Ho-Ching
Huang, Ching-Yin
Cheng, Yu-Fan
Goto, Shigeru
Chen, Chao-Long
author_facet Chiu, King-Wah
Nakano, Toshiaki
Chen, Kuang-Den
Lai, Chia-Yun
Hsu, Li-Wen
Chiu, Ho-Ching
Huang, Ching-Yin
Cheng, Yu-Fan
Goto, Shigeru
Chen, Chao-Long
author_sort Chiu, King-Wah
collection PubMed
description This study used pyrosequencing to determine the proportional distribution of CYP3A5*3 genotypes to further confirm the homogeneous phenomenon that is observed when recipients and donors in living donor liver transplantation (LDLT) have a different single nucleotide polymorphism (SNP) genotype. We enrolled 42 recipient/living donor pairs and the SNPs of CYP3A5*3 were identified by polymerase chain reaction-restriction fragment length polymorphism. We performed 120 liver graft biopsies as part of clinical investigations after LDLT. Pyrosequencing of the CYP3A5*3 SNPs revealed that among the 16 recipients with the G/G genotype, 94.68% had the G and 5.32% the A allele. Among the 14 recipients with the A/G genotype, 78.08% had the G and 21.92% the A allele, and among the 12 recipients with the A/A genotype, 18.45% had the G and 81.55% the A allele. Among the 12 donors with the G/G genotype, 93.85% had the G and 6.14% the A allele. Among the 26 donors with the A/G genotype, 75.73% had the G and 24.27% the A allele, and among the 4 donors with the A/A genotype, 11.09% had the G and 88.91% the A allele. There were a total of 120 liver graft biopsy samples; among the 37 recipients with the G/G genotype, 89.74% had the G and 10.26% the A allele, among the 70 recipients with the A/G genotype, 71.57% had the G and 28.43% the A allele, and among the 13 recipients with the A/A genotype, 48.25% had the G and 51.75% the A allele. The proportional distribution of G and A alleles of the CYP3A5*3 SNP between recipients/donors and liver grafts after LDLT was significantly different (p<0.001). Pyrosequencing was useful in identifying detailed proportional changes of the CYP3A5*3 SNP allele distribution, and to confirm the homogeneous phenomenon when recipients and donors in LDLT have a different genotype.
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spelling pubmed-37385982013-08-15 Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation Chiu, King-Wah Nakano, Toshiaki Chen, Kuang-Den Lai, Chia-Yun Hsu, Li-Wen Chiu, Ho-Ching Huang, Ching-Yin Cheng, Yu-Fan Goto, Shigeru Chen, Chao-Long PLoS One Research Article This study used pyrosequencing to determine the proportional distribution of CYP3A5*3 genotypes to further confirm the homogeneous phenomenon that is observed when recipients and donors in living donor liver transplantation (LDLT) have a different single nucleotide polymorphism (SNP) genotype. We enrolled 42 recipient/living donor pairs and the SNPs of CYP3A5*3 were identified by polymerase chain reaction-restriction fragment length polymorphism. We performed 120 liver graft biopsies as part of clinical investigations after LDLT. Pyrosequencing of the CYP3A5*3 SNPs revealed that among the 16 recipients with the G/G genotype, 94.68% had the G and 5.32% the A allele. Among the 14 recipients with the A/G genotype, 78.08% had the G and 21.92% the A allele, and among the 12 recipients with the A/A genotype, 18.45% had the G and 81.55% the A allele. Among the 12 donors with the G/G genotype, 93.85% had the G and 6.14% the A allele. Among the 26 donors with the A/G genotype, 75.73% had the G and 24.27% the A allele, and among the 4 donors with the A/A genotype, 11.09% had the G and 88.91% the A allele. There were a total of 120 liver graft biopsy samples; among the 37 recipients with the G/G genotype, 89.74% had the G and 10.26% the A allele, among the 70 recipients with the A/G genotype, 71.57% had the G and 28.43% the A allele, and among the 13 recipients with the A/A genotype, 48.25% had the G and 51.75% the A allele. The proportional distribution of G and A alleles of the CYP3A5*3 SNP between recipients/donors and liver grafts after LDLT was significantly different (p<0.001). Pyrosequencing was useful in identifying detailed proportional changes of the CYP3A5*3 SNP allele distribution, and to confirm the homogeneous phenomenon when recipients and donors in LDLT have a different genotype. Public Library of Science 2013-08-08 /pmc/articles/PMC3738598/ /pubmed/23951129 http://dx.doi.org/10.1371/journal.pone.0071314 Text en © 2013 Chiu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Chiu, King-Wah
Nakano, Toshiaki
Chen, Kuang-Den
Lai, Chia-Yun
Hsu, Li-Wen
Chiu, Ho-Ching
Huang, Ching-Yin
Cheng, Yu-Fan
Goto, Shigeru
Chen, Chao-Long
Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation
title Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation
title_full Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation
title_fullStr Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation
title_full_unstemmed Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation
title_short Pyrosequencing to Identify Homogeneous Phenomenon When Using Recipients/Donors with Different CYP3A5*3 Genotypes in Living Donor Liver Transplantation
title_sort pyrosequencing to identify homogeneous phenomenon when using recipients/donors with different cyp3a5*3 genotypes in living donor liver transplantation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3738598/
https://www.ncbi.nlm.nih.gov/pubmed/23951129
http://dx.doi.org/10.1371/journal.pone.0071314
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