Cargando…

De Novo Assembly and Characterization of the Transcriptome, and Development of SSR Markers in Wax Gourd (Benicasa hispida)

BACKGROUND: Wax gourd is a widely used vegetable of Cucuribtaceae, and also has important medicinal and health values. However, the genomic resources of wax gourd were scarcity, and only a few nucleotide sequences could be obtained in public databases. METHODOLOGY/PRINCIPAL FINDINGS: In this study,...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jiang, Biao, Xie, Dasen, Liu, Wenrui, Peng, Qingwu, He, Xiaoming
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3738631/ https://www.ncbi.nlm.nih.gov/pubmed/23951078 http://dx.doi.org/10.1371/journal.pone.0071054

Ejemplares similares

A chromosome-level reference genome of the wax gourd (Benincasa hispida)
por: Luo, Wenlong, et al.
Publicado: (2023)

Genome-Wide Identification of the SAUR Gene Family in Wax Gourd (Benincasa hispida) and Functional Characterization of BhSAUR60 during Fruit Development
por: Luo, Chen, et al.
Publicado: (2022)

Genetic mapping and genome-wide association study identify BhYAB4 as the candidate gene regulating seed shape in wax gourd (Benincasa hispida)
por: Luo, Chen, et al.
Publicado: (2022)

High-density genetic map construction and gene mapping of pericarp color in wax gourd using specific-locus amplified fragment (SLAF) sequencing
por: Jiang, Biao, et al.
Publicado: (2015)

Genome-wide association study and genetic mapping of BhWAX conferring mature fruit cuticular wax in wax gourd
por: Yan, Jinqiang, et al.
Publicado: (2022)

The wax gourd genomes offer insights into the genetic diversity and ancestral cucurbit karyotype
por: Xie, Dasen, et al.
Publicado: (2019)

Fine mapping of the major gene BhHLS1 controlling seed size in wax gourd (Benincasa hispida)
por: Yang, Wenrui, et al.
Publicado: (2023)

Identification and Application of BhAPRR2 Controlling Peel Colour in Wax Gourd (Benincasa hispida)
por: Ma, Lianlian, et al.
Publicado: (2021)

Comparative transcriptome provides insights into gene regulation network associated with the resistance to Fusarium wilt in grafted wax gourd Benincasa hispida
por: Zhu, Baibi, et al.
Publicado: (2023)

Fine Mapping and Functional Analysis of Major Regulatory Genes of Soluble Solids Content in Wax Gourd (Benincasa hispida)
por: Wu, Wenting, et al.
Publicado: (2022)

A transcriptome analysis of Benincasa hispida revealed the pathways and genes involved in response to Phytophthora melonis infection
por: Cai, Jinsen, et al.
Publicado: (2022)

A time-course transcriptome analysis of wax gourd fruit development reveals predominant genes regulating taste and nutrition
por: Xue, Shudan, et al.
Publicado: (2022)

Comparative Chloroplast Genome Analysis of Wax Gourd (Benincasa hispida) with Three Benincaseae Species, Revealing Evolutionary Dynamic Patterns and Phylogenetic Implications
por: Song, Weicai, et al.
Publicado: (2022)

Fine mapping and candidate gene analysis of gynoecy trait in chieh-qua (Benincasa hispida Cogn. var. chieh-qua How)
por: Wang, Min, et al.
Publicado: (2023)

Transcriptome Analyses Provide Novel Insights into Heat Stress Responses in Chieh-Qua (Benincasa hispida Cogn. var. Chieh-Qua How)
por: Wang, Min, et al.
Publicado: (2019)

Magnesium Deficiency Reduced the Yield and Seed Germination in Wax Gourd by Affecting the Carbohydrate Translocation
por: Zhang, Baige, et al.
Publicado: (2020)

Integrated analysis of multi-omics and fine-mapping reveals a candidate gene regulating pericarp color and flavonoids accumulation in wax gourd (Benincasa hispida)
por: Xie, Lingling, et al.
Publicado: (2022)

Development of SSR markers in Paeonia based on De Novo transcriptomic assemblies
por: He, Dan, et al.
Publicado: (2020)

Development and Application of InDel Markers Linked to Fruit-Shape and Peel-Colour Genes in Wax Gourd
por: Huang, Xiaochun, et al.
Publicado: (2022)

De Novo Assembly of Transcriptome Sequencing in Caragana korshinskii Kom. and Characterization of EST-SSR Markers
por: Long, Yan, et al.
Publicado: (2015)

De Novo Transcriptome Assembly and EST-SSR Marker Development and Application in Chrysosplenium macrophyllum
por: Xiang, Niyan, et al.
Publicado: (2023)

De novo Assembly and Characterization of the Testis Transcriptome and Development of EST-SSR Markers in the Cockroach Periplaneta americana
por: Chen, Wan, et al.
Publicado: (2015)

De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery
por: Deng, Tingxian, et al.
Publicado: (2016)

Corrigendum: De novo Assembly and Characterization of the Testis Transcriptome and Development of EST-SSR Markers in the Cockroach Periplaneta americana
por: Chen, Wan, et al.
Publicado: (2015)

De Novo Assembly of Bitter Gourd Transcriptomes: Gene Expression and Sequence Variations in Gynoecious and Monoecious Lines
por: Shukla, Anjali, et al.
Publicado: (2015)

De novo assembly of Iron-Heart Cunninghamia lanceolata transcriptome and EST-SSR marker development for genetic diversity analysis
por: Liu, Sen, et al.
Publicado: (2023)

De Novo Assembly and Characterization of the Fruit Transcriptome of Chinese Jujube (Ziziphus jujuba Mill.) Using 454 Pyrosequencing and the Development of Novel Tri-Nucleotide SSR Markers
por: Li, Yingyue, et al.
Publicado: (2014)

De Novo Assembly of Auricularia polytricha Transcriptome Using Illumina Sequencing for Gene Discovery and SSR Marker Identification
por: Zhou, Yan, et al.
Publicado: (2014)

Development of novel EST-SSR markers for ploidy identification based on de novo transcriptome assembly for Misgurnus anguillicaudatus
por: Feng, Bing, et al.
Publicado: (2018)

De novo Transcriptome Assembly, Gene Annotation and SSR Marker Development in the Moon Seed Genus Menispermum (Menispermaceae)
por: Hina, Faiza, et al.
Publicado: (2020)

De Novo Transcriptome Assembly, Functional Annotation and SSR Marker Discovery of Qinling Takin (Budorcas taxicolor bedfordi)
por: Qiu, Ju, et al.
Publicado: (2021)

Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers
por: Sathyanarayana, N., et al.
Publicado: (2017)

Analysis of Genetic Diversity and Population Structure in Bitter Gourd (Momordica charantia L.) Using Morphological and SSR Markers
por: Alhariri, Ahmad, et al.
Publicado: (2021)

De novo transcriptomic analysis and identification of EST-SSR markers in Stephanandra incisa
por: Zhang, Cuiping, et al.
Publicado: (2021)

De Novo Assembly of Transcriptome and Development of Novel EST-SSR Markers in Rhododendron rex Lévl. through Illumina Sequencing
por: Zhang, Yue, et al.
Publicado: (2017)

De novo Assembly, Characterization of Immature Seed Transcriptome and Development of Genic-SSR Markers in Black Gram [Vigna mungo (L.) Hepper]
por: Souframanien, J., et al.
Publicado: (2015)

De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.)
por: Zhang, Jianan, et al.
Publicado: (2012)

De novo transcriptome assembly, development of EST-SSR markers and population genetic analyses for the desert biomass willow, Salix psammophila
por: Jia, Huixia, et al.
Publicado: (2016)

De novo transcriptome assembly, polymorphic SSR markers development and population genetics analyses for southern corn rust (Puccinia polysora)
por: Sun, Qiuyu, et al.
Publicado: (2021)

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)
por: Wang, Zhangying, et al.
Publicado: (2010)

Cannot write session to /tmp/vufind_sessions/sess_fe57lehf4gmd4kmob4g6orklnc