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To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements

Flux balance analysis and constraint based modeling have been successfully used in the past to elucidate the metabolism of single cellular organisms. However, limited work has been done with multicellular organisms and even less with humans. The focus of this paper is to present a novel use of this...

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Detalles Bibliográficos
Autores principales: Nogiec, Christopher D., Kasif, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3740736/
https://www.ncbi.nlm.nih.gov/pubmed/23967053
http://dx.doi.org/10.1371/journal.pone.0068751
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author Nogiec, Christopher D.
Kasif, Simon
author_facet Nogiec, Christopher D.
Kasif, Simon
author_sort Nogiec, Christopher D.
collection PubMed
description Flux balance analysis and constraint based modeling have been successfully used in the past to elucidate the metabolism of single cellular organisms. However, limited work has been done with multicellular organisms and even less with humans. The focus of this paper is to present a novel use of this technique by investigating human nutrition, a challenging field of study. Specifically, we present a steady state constraint based model of skeletal muscle tissue to investigate amino acid supplementation's effect on protein synthesis. We implement several in silico supplementation strategies to study whether amino acid supplementation might be beneficial for increasing muscle contractile protein synthesis. Concurrent with published data on amino acid supplementation's effect on protein synthesis in a post resistance exercise state, our results suggest that increasing bioavailability of methionine, arginine, and the branched-chain amino acids can increase the flux of contractile protein synthesis. The study also suggests that a common commercial supplement, glutamine, is not an effective supplement in the context of increasing protein synthesis and thus, muscle mass. Similar to any study in a model organism, the computational modeling of this research has some limitations. Thus, this paper introduces the prospect of using systems biology as a framework to formally investigate how supplementation and nutrition can affect human metabolism and physiology.
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spelling pubmed-37407362013-08-21 To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements Nogiec, Christopher D. Kasif, Simon PLoS One Research Article Flux balance analysis and constraint based modeling have been successfully used in the past to elucidate the metabolism of single cellular organisms. However, limited work has been done with multicellular organisms and even less with humans. The focus of this paper is to present a novel use of this technique by investigating human nutrition, a challenging field of study. Specifically, we present a steady state constraint based model of skeletal muscle tissue to investigate amino acid supplementation's effect on protein synthesis. We implement several in silico supplementation strategies to study whether amino acid supplementation might be beneficial for increasing muscle contractile protein synthesis. Concurrent with published data on amino acid supplementation's effect on protein synthesis in a post resistance exercise state, our results suggest that increasing bioavailability of methionine, arginine, and the branched-chain amino acids can increase the flux of contractile protein synthesis. The study also suggests that a common commercial supplement, glutamine, is not an effective supplement in the context of increasing protein synthesis and thus, muscle mass. Similar to any study in a model organism, the computational modeling of this research has some limitations. Thus, this paper introduces the prospect of using systems biology as a framework to formally investigate how supplementation and nutrition can affect human metabolism and physiology. Public Library of Science 2013-08-05 /pmc/articles/PMC3740736/ /pubmed/23967053 http://dx.doi.org/10.1371/journal.pone.0068751 Text en © 2013 Nogiec, Kasif http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Nogiec, Christopher D.
Kasif, Simon
To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements
title To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements
title_full To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements
title_fullStr To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements
title_full_unstemmed To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements
title_short To Supplement or Not to Supplement: A Metabolic Network Framework for Human Nutritional Supplements
title_sort to supplement or not to supplement: a metabolic network framework for human nutritional supplements
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3740736/
https://www.ncbi.nlm.nih.gov/pubmed/23967053
http://dx.doi.org/10.1371/journal.pone.0068751
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