Cargando…
Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
Poly-ADP-ribosylation is a post-translational modification that regulates processes involved in genome stability. Breakdown of the poly(ADP-ribose) (PAR) polymer is catalysed by poly(ADP-ribose) glycohydrolase (PARG), whose endo-glycohydrolase activity generates PAR fragments. Here we present the cr...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Pub. Group
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3741636/ https://www.ncbi.nlm.nih.gov/pubmed/23917065 http://dx.doi.org/10.1038/ncomms3164 |
_version_ | 1782280284855599104 |
---|---|
author | Barkauskaite, Eva Brassington, Amy Tan, Edwin S. Warwicker, Jim Dunstan, Mark S. Banos, Benito Lafite, Pierre Ahel, Marijan Mitchison, Timothy J. Ahel, Ivan Leys, David |
author_facet | Barkauskaite, Eva Brassington, Amy Tan, Edwin S. Warwicker, Jim Dunstan, Mark S. Banos, Benito Lafite, Pierre Ahel, Marijan Mitchison, Timothy J. Ahel, Ivan Leys, David |
author_sort | Barkauskaite, Eva |
collection | PubMed |
description | Poly-ADP-ribosylation is a post-translational modification that regulates processes involved in genome stability. Breakdown of the poly(ADP-ribose) (PAR) polymer is catalysed by poly(ADP-ribose) glycohydrolase (PARG), whose endo-glycohydrolase activity generates PAR fragments. Here we present the crystal structure of PARG incorporating the PAR substrate. The two terminal ADP-ribose units of the polymeric substrate are bound in exo-mode. Biochemical and modelling studies reveal that PARG acts predominantly as an exo-glycohydrolase. This preference is linked to Phe902 (human numbering), which is responsible for low-affinity binding of the substrate in endo-mode. Our data reveal the mechanism of poly-ADP-ribosylation reversal, with ADP-ribose as the dominant product, and suggest that the release of apoptotic PAR fragments occurs at unusual PAR/PARG ratios. |
format | Online Article Text |
id | pubmed-3741636 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Pub. Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-37416362013-08-13 Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities Barkauskaite, Eva Brassington, Amy Tan, Edwin S. Warwicker, Jim Dunstan, Mark S. Banos, Benito Lafite, Pierre Ahel, Marijan Mitchison, Timothy J. Ahel, Ivan Leys, David Nat Commun Article Poly-ADP-ribosylation is a post-translational modification that regulates processes involved in genome stability. Breakdown of the poly(ADP-ribose) (PAR) polymer is catalysed by poly(ADP-ribose) glycohydrolase (PARG), whose endo-glycohydrolase activity generates PAR fragments. Here we present the crystal structure of PARG incorporating the PAR substrate. The two terminal ADP-ribose units of the polymeric substrate are bound in exo-mode. Biochemical and modelling studies reveal that PARG acts predominantly as an exo-glycohydrolase. This preference is linked to Phe902 (human numbering), which is responsible for low-affinity binding of the substrate in endo-mode. Our data reveal the mechanism of poly-ADP-ribosylation reversal, with ADP-ribose as the dominant product, and suggest that the release of apoptotic PAR fragments occurs at unusual PAR/PARG ratios. Nature Pub. Group 2013-08-06 /pmc/articles/PMC3741636/ /pubmed/23917065 http://dx.doi.org/10.1038/ncomms3164 Text en Copyright © 2013, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Barkauskaite, Eva Brassington, Amy Tan, Edwin S. Warwicker, Jim Dunstan, Mark S. Banos, Benito Lafite, Pierre Ahel, Marijan Mitchison, Timothy J. Ahel, Ivan Leys, David Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities |
title | Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities |
title_full | Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities |
title_fullStr | Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities |
title_full_unstemmed | Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities |
title_short | Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities |
title_sort | visualization of poly(adp-ribose) bound to parg reveals inherent balance between exo- and endo-glycohydrolase activities |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3741636/ https://www.ncbi.nlm.nih.gov/pubmed/23917065 http://dx.doi.org/10.1038/ncomms3164 |
work_keys_str_mv | AT barkauskaiteeva visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT brassingtonamy visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT tanedwins visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT warwickerjim visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT dunstanmarks visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT banosbenito visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT lafitepierre visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT ahelmarijan visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT mitchisontimothyj visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT ahelivan visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities AT leysdavid visualizationofpolyadpriboseboundtopargrevealsinherentbalancebetweenexoandendoglycohydrolaseactivities |