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Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities

Poly-ADP-ribosylation is a post-translational modification that regulates processes involved in genome stability. Breakdown of the poly(ADP-ribose) (PAR) polymer is catalysed by poly(ADP-ribose) glycohydrolase (PARG), whose endo-glycohydrolase activity generates PAR fragments. Here we present the cr...

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Autores principales: Barkauskaite, Eva, Brassington, Amy, Tan, Edwin S., Warwicker, Jim, Dunstan, Mark S., Banos, Benito, Lafite, Pierre, Ahel, Marijan, Mitchison, Timothy J., Ahel, Ivan, Leys, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Pub. Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3741636/
https://www.ncbi.nlm.nih.gov/pubmed/23917065
http://dx.doi.org/10.1038/ncomms3164
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author Barkauskaite, Eva
Brassington, Amy
Tan, Edwin S.
Warwicker, Jim
Dunstan, Mark S.
Banos, Benito
Lafite, Pierre
Ahel, Marijan
Mitchison, Timothy J.
Ahel, Ivan
Leys, David
author_facet Barkauskaite, Eva
Brassington, Amy
Tan, Edwin S.
Warwicker, Jim
Dunstan, Mark S.
Banos, Benito
Lafite, Pierre
Ahel, Marijan
Mitchison, Timothy J.
Ahel, Ivan
Leys, David
author_sort Barkauskaite, Eva
collection PubMed
description Poly-ADP-ribosylation is a post-translational modification that regulates processes involved in genome stability. Breakdown of the poly(ADP-ribose) (PAR) polymer is catalysed by poly(ADP-ribose) glycohydrolase (PARG), whose endo-glycohydrolase activity generates PAR fragments. Here we present the crystal structure of PARG incorporating the PAR substrate. The two terminal ADP-ribose units of the polymeric substrate are bound in exo-mode. Biochemical and modelling studies reveal that PARG acts predominantly as an exo-glycohydrolase. This preference is linked to Phe902 (human numbering), which is responsible for low-affinity binding of the substrate in endo-mode. Our data reveal the mechanism of poly-ADP-ribosylation reversal, with ADP-ribose as the dominant product, and suggest that the release of apoptotic PAR fragments occurs at unusual PAR/PARG ratios.
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spelling pubmed-37416362013-08-13 Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities Barkauskaite, Eva Brassington, Amy Tan, Edwin S. Warwicker, Jim Dunstan, Mark S. Banos, Benito Lafite, Pierre Ahel, Marijan Mitchison, Timothy J. Ahel, Ivan Leys, David Nat Commun Article Poly-ADP-ribosylation is a post-translational modification that regulates processes involved in genome stability. Breakdown of the poly(ADP-ribose) (PAR) polymer is catalysed by poly(ADP-ribose) glycohydrolase (PARG), whose endo-glycohydrolase activity generates PAR fragments. Here we present the crystal structure of PARG incorporating the PAR substrate. The two terminal ADP-ribose units of the polymeric substrate are bound in exo-mode. Biochemical and modelling studies reveal that PARG acts predominantly as an exo-glycohydrolase. This preference is linked to Phe902 (human numbering), which is responsible for low-affinity binding of the substrate in endo-mode. Our data reveal the mechanism of poly-ADP-ribosylation reversal, with ADP-ribose as the dominant product, and suggest that the release of apoptotic PAR fragments occurs at unusual PAR/PARG ratios. Nature Pub. Group 2013-08-06 /pmc/articles/PMC3741636/ /pubmed/23917065 http://dx.doi.org/10.1038/ncomms3164 Text en Copyright © 2013, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/
spellingShingle Article
Barkauskaite, Eva
Brassington, Amy
Tan, Edwin S.
Warwicker, Jim
Dunstan, Mark S.
Banos, Benito
Lafite, Pierre
Ahel, Marijan
Mitchison, Timothy J.
Ahel, Ivan
Leys, David
Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
title Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
title_full Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
title_fullStr Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
title_full_unstemmed Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
title_short Visualization of poly(ADP-ribose) bound to PARG reveals inherent balance between exo- and endo-glycohydrolase activities
title_sort visualization of poly(adp-ribose) bound to parg reveals inherent balance between exo- and endo-glycohydrolase activities
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3741636/
https://www.ncbi.nlm.nih.gov/pubmed/23917065
http://dx.doi.org/10.1038/ncomms3164
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