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Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level

Biotechnological approaches using genetic modifications such as homologous gene overexpression can be used to decode gene functions under well-defined circumstances. However, only the recording of the resulting phenotypes allows inferences about the impact of the modification on the organisms’ evolu...

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Autores principales: Vaas, Lea A. I., Marheine, Maja, Sikorski, Johannes, Göker, Markus, Schumacher, Heinz-Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742292/
https://www.ncbi.nlm.nih.gov/pubmed/23880863
http://dx.doi.org/10.3390/ijms140715141
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author Vaas, Lea A. I.
Marheine, Maja
Sikorski, Johannes
Göker, Markus
Schumacher, Heinz-Martin
author_facet Vaas, Lea A. I.
Marheine, Maja
Sikorski, Johannes
Göker, Markus
Schumacher, Heinz-Martin
author_sort Vaas, Lea A. I.
collection PubMed
description Biotechnological approaches using genetic modifications such as homologous gene overexpression can be used to decode gene functions under well-defined circumstances. However, only the recording of the resulting phenotypes allows inferences about the impact of the modification on the organisms’ evolutionary, ecological or economic performance. We here compare a potato wild-type cell line with two genetically engineered cell cultures homologously overexpressing Pathogenesis Related Protein 10a (pr-10a). A detailed analysis of the relative gene-expression patterns of pr-10a and its regulators sebf and pti4 over time provides insights into the molecular response of heterotrophic cells to distinct osmotic and salt-stress conditions. Furthermore, this system serves as an exemplar for the tracing of respiration kinetics as a faster and more sensitive alternative to the laborious and time-consuming recording of growth curves. The utility and characteristics of the resulting data type and the requirements for its appropriate analysis are figured out. It is demonstrated how this novel type of phenotypic information together with the gene-expression-data provides valuable insights into the effect of genetic modifications on the behaviour of cells on both the molecular and the macroscopic level.
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spelling pubmed-37422922013-08-13 Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level Vaas, Lea A. I. Marheine, Maja Sikorski, Johannes Göker, Markus Schumacher, Heinz-Martin Int J Mol Sci Article Biotechnological approaches using genetic modifications such as homologous gene overexpression can be used to decode gene functions under well-defined circumstances. However, only the recording of the resulting phenotypes allows inferences about the impact of the modification on the organisms’ evolutionary, ecological or economic performance. We here compare a potato wild-type cell line with two genetically engineered cell cultures homologously overexpressing Pathogenesis Related Protein 10a (pr-10a). A detailed analysis of the relative gene-expression patterns of pr-10a and its regulators sebf and pti4 over time provides insights into the molecular response of heterotrophic cells to distinct osmotic and salt-stress conditions. Furthermore, this system serves as an exemplar for the tracing of respiration kinetics as a faster and more sensitive alternative to the laborious and time-consuming recording of growth curves. The utility and characteristics of the resulting data type and the requirements for its appropriate analysis are figured out. It is demonstrated how this novel type of phenotypic information together with the gene-expression-data provides valuable insights into the effect of genetic modifications on the behaviour of cells on both the molecular and the macroscopic level. Molecular Diversity Preservation International (MDPI) 2013-07-22 /pmc/articles/PMC3742292/ /pubmed/23880863 http://dx.doi.org/10.3390/ijms140715141 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland http://creativecommons.org/licenses/by/3.0 This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Vaas, Lea A. I.
Marheine, Maja
Sikorski, Johannes
Göker, Markus
Schumacher, Heinz-Martin
Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level
title Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level
title_full Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level
title_fullStr Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level
title_full_unstemmed Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level
title_short Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level
title_sort impacts of pr-10a overexpression at the molecular and the phenotypic level
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742292/
https://www.ncbi.nlm.nih.gov/pubmed/23880863
http://dx.doi.org/10.3390/ijms140715141
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