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Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
The genome of the fish pathogen Aeromonas salmonicida subsp salmonicida harbors a large number of insertion sequences (ISs), many of which are located on plasmids. In the present study, we analyzed the small plasmid profile of A. salmonicida strains to identify evidences of plasmid alterations. Ten...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Landes Bioscience
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742599/ https://www.ncbi.nlm.nih.gov/pubmed/23956951 http://dx.doi.org/10.4161/mge.25640 |
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author | Trudel, Mélanie V. Tanaka, Katherine H. Filion, Geneviève Daher, Rana K. Frenette, Michel Charette, Steve J. |
author_facet | Trudel, Mélanie V. Tanaka, Katherine H. Filion, Geneviève Daher, Rana K. Frenette, Michel Charette, Steve J. |
author_sort | Trudel, Mélanie V. |
collection | PubMed |
description | The genome of the fish pathogen Aeromonas salmonicida subsp salmonicida harbors a large number of insertion sequences (ISs), many of which are located on plasmids. In the present study, we analyzed the small plasmid profile of A. salmonicida strains to identify evidences of plasmid alterations. Ten out of 78 strains analyzed displayed an unconventional plasmid profile. However the HER1104 strain was unique, having a positive PCR signal for pAsal1 plasmid despite not carrying this plasmid. Instead, HER1104 was bearing a plasmid at higher molecular weight than pAsal1. We characterized this new larger plasmid, which we called pAsal1B since it is a derivative of pAsal1 containing one more complete IS (ISAS5) than the parental plasmid. An additional 96 bp relic of ISAS5 was also present in pAsal1B. These results propose that ISAS5 is another active mobile genetic element in A. salmonicida subsp salmonicida and provided further proof of the genomic plasticity of this bacterium. |
format | Online Article Text |
id | pubmed-3742599 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Landes Bioscience |
record_format | MEDLINE/PubMed |
spelling | pubmed-37425992013-08-16 Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida Trudel, Mélanie V. Tanaka, Katherine H. Filion, Geneviève Daher, Rana K. Frenette, Michel Charette, Steve J. Mob Genet Elements Research Paper The genome of the fish pathogen Aeromonas salmonicida subsp salmonicida harbors a large number of insertion sequences (ISs), many of which are located on plasmids. In the present study, we analyzed the small plasmid profile of A. salmonicida strains to identify evidences of plasmid alterations. Ten out of 78 strains analyzed displayed an unconventional plasmid profile. However the HER1104 strain was unique, having a positive PCR signal for pAsal1 plasmid despite not carrying this plasmid. Instead, HER1104 was bearing a plasmid at higher molecular weight than pAsal1. We characterized this new larger plasmid, which we called pAsal1B since it is a derivative of pAsal1 containing one more complete IS (ISAS5) than the parental plasmid. An additional 96 bp relic of ISAS5 was also present in pAsal1B. These results propose that ISAS5 is another active mobile genetic element in A. salmonicida subsp salmonicida and provided further proof of the genomic plasticity of this bacterium. Landes Bioscience 2013-05-01 2013-07-08 /pmc/articles/PMC3742599/ /pubmed/23956951 http://dx.doi.org/10.4161/mge.25640 Text en Copyright © 2013 Landes Bioscience http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited. |
spellingShingle | Research Paper Trudel, Mélanie V. Tanaka, Katherine H. Filion, Geneviève Daher, Rana K. Frenette, Michel Charette, Steve J. Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida |
title | Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida |
title_full | Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida |
title_fullStr | Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida |
title_full_unstemmed | Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida |
title_short | Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida |
title_sort | insertion sequence as5 (isas5) is involved in the genomic plasticity of aeromonas salmonicida |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742599/ https://www.ncbi.nlm.nih.gov/pubmed/23956951 http://dx.doi.org/10.4161/mge.25640 |
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