Cargando…

Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida

The genome of the fish pathogen Aeromonas salmonicida subsp salmonicida harbors a large number of insertion sequences (ISs), many of which are located on plasmids. In the present study, we analyzed the small plasmid profile of A. salmonicida strains to identify evidences of plasmid alterations. Ten...

Descripción completa

Detalles Bibliográficos
Autores principales: Trudel, Mélanie V., Tanaka, Katherine H., Filion, Geneviève, Daher, Rana K., Frenette, Michel, Charette, Steve J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Landes Bioscience 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742599/
https://www.ncbi.nlm.nih.gov/pubmed/23956951
http://dx.doi.org/10.4161/mge.25640
_version_ 1782280390932692992
author Trudel, Mélanie V.
Tanaka, Katherine H.
Filion, Geneviève
Daher, Rana K.
Frenette, Michel
Charette, Steve J.
author_facet Trudel, Mélanie V.
Tanaka, Katherine H.
Filion, Geneviève
Daher, Rana K.
Frenette, Michel
Charette, Steve J.
author_sort Trudel, Mélanie V.
collection PubMed
description The genome of the fish pathogen Aeromonas salmonicida subsp salmonicida harbors a large number of insertion sequences (ISs), many of which are located on plasmids. In the present study, we analyzed the small plasmid profile of A. salmonicida strains to identify evidences of plasmid alterations. Ten out of 78 strains analyzed displayed an unconventional plasmid profile. However the HER1104 strain was unique, having a positive PCR signal for pAsal1 plasmid despite not carrying this plasmid. Instead, HER1104 was bearing a plasmid at higher molecular weight than pAsal1. We characterized this new larger plasmid, which we called pAsal1B since it is a derivative of pAsal1 containing one more complete IS (ISAS5) than the parental plasmid. An additional 96 bp relic of ISAS5 was also present in pAsal1B. These results propose that ISAS5 is another active mobile genetic element in A. salmonicida subsp salmonicida and provided further proof of the genomic plasticity of this bacterium.
format Online
Article
Text
id pubmed-3742599
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Landes Bioscience
record_format MEDLINE/PubMed
spelling pubmed-37425992013-08-16 Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida Trudel, Mélanie V. Tanaka, Katherine H. Filion, Geneviève Daher, Rana K. Frenette, Michel Charette, Steve J. Mob Genet Elements Research Paper The genome of the fish pathogen Aeromonas salmonicida subsp salmonicida harbors a large number of insertion sequences (ISs), many of which are located on plasmids. In the present study, we analyzed the small plasmid profile of A. salmonicida strains to identify evidences of plasmid alterations. Ten out of 78 strains analyzed displayed an unconventional plasmid profile. However the HER1104 strain was unique, having a positive PCR signal for pAsal1 plasmid despite not carrying this plasmid. Instead, HER1104 was bearing a plasmid at higher molecular weight than pAsal1. We characterized this new larger plasmid, which we called pAsal1B since it is a derivative of pAsal1 containing one more complete IS (ISAS5) than the parental plasmid. An additional 96 bp relic of ISAS5 was also present in pAsal1B. These results propose that ISAS5 is another active mobile genetic element in A. salmonicida subsp salmonicida and provided further proof of the genomic plasticity of this bacterium. Landes Bioscience 2013-05-01 2013-07-08 /pmc/articles/PMC3742599/ /pubmed/23956951 http://dx.doi.org/10.4161/mge.25640 Text en Copyright © 2013 Landes Bioscience http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Research Paper
Trudel, Mélanie V.
Tanaka, Katherine H.
Filion, Geneviève
Daher, Rana K.
Frenette, Michel
Charette, Steve J.
Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
title Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
title_full Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
title_fullStr Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
title_full_unstemmed Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
title_short Insertion sequence AS5 (ISAS5) is involved in the genomic plasticity of Aeromonas salmonicida
title_sort insertion sequence as5 (isas5) is involved in the genomic plasticity of aeromonas salmonicida
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742599/
https://www.ncbi.nlm.nih.gov/pubmed/23956951
http://dx.doi.org/10.4161/mge.25640
work_keys_str_mv AT trudelmelaniev insertionsequenceas5isas5isinvolvedinthegenomicplasticityofaeromonassalmonicida
AT tanakakatherineh insertionsequenceas5isas5isinvolvedinthegenomicplasticityofaeromonassalmonicida
AT filiongenevieve insertionsequenceas5isas5isinvolvedinthegenomicplasticityofaeromonassalmonicida
AT daherranak insertionsequenceas5isas5isinvolvedinthegenomicplasticityofaeromonassalmonicida
AT frenettemichel insertionsequenceas5isas5isinvolvedinthegenomicplasticityofaeromonassalmonicida
AT charettestevej insertionsequenceas5isas5isinvolvedinthegenomicplasticityofaeromonassalmonicida