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A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer

p38 plays a critical role in the proliferation, survival, migration and metastasis of colorectal cancer (CRC) cells. The present study assessed the correlation between a single nucleotide polymorphism (SNP) in the p38β promoter region (rs2235356, -1628A>G) and the predisposition of individuals to...

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Autores principales: HUANG, QINGHUA, CHEN, DIANKE, SONG, SHUNXIN, FU, XINHUI, WEI, YISHENG, LU, JIACHUN, WANG, LEI, WANG, JIANPING
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742754/
https://www.ncbi.nlm.nih.gov/pubmed/23946768
http://dx.doi.org/10.3892/ol.2013.1334
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author HUANG, QINGHUA
CHEN, DIANKE
SONG, SHUNXIN
FU, XINHUI
WEI, YISHENG
LU, JIACHUN
WANG, LEI
WANG, JIANPING
author_facet HUANG, QINGHUA
CHEN, DIANKE
SONG, SHUNXIN
FU, XINHUI
WEI, YISHENG
LU, JIACHUN
WANG, LEI
WANG, JIANPING
author_sort HUANG, QINGHUA
collection PubMed
description p38 plays a critical role in the proliferation, survival, migration and metastasis of colorectal cancer (CRC) cells. The present study assessed the correlation between a single nucleotide polymorphism (SNP) in the p38β promoter region (rs2235356, -1628A>G) and the predisposition of individuals to sporadic CRC in a case-control study. A genotyping method was developed to detect this SNP, using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis. A logistic regression analysis was used to determine the odds ratio (OR) and 95% confidence interval (CI). It was revealed that the -1628G variant allele was correlated with an increased risk of CRC (OR, 1.99; 95% CI, 1.60–2.47; P<0.0001). An in silico analysis revealed several transcription factors that either acquired or lost the ability to bind to -1628AA in the p38β promoter region due to the SNP. Therefore, this allelic variant may be a genetic modifier for CRC susceptibility.
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spelling pubmed-37427542013-08-14 A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer HUANG, QINGHUA CHEN, DIANKE SONG, SHUNXIN FU, XINHUI WEI, YISHENG LU, JIACHUN WANG, LEI WANG, JIANPING Oncol Lett Articles p38 plays a critical role in the proliferation, survival, migration and metastasis of colorectal cancer (CRC) cells. The present study assessed the correlation between a single nucleotide polymorphism (SNP) in the p38β promoter region (rs2235356, -1628A>G) and the predisposition of individuals to sporadic CRC in a case-control study. A genotyping method was developed to detect this SNP, using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis. A logistic regression analysis was used to determine the odds ratio (OR) and 95% confidence interval (CI). It was revealed that the -1628G variant allele was correlated with an increased risk of CRC (OR, 1.99; 95% CI, 1.60–2.47; P<0.0001). An in silico analysis revealed several transcription factors that either acquired or lost the ability to bind to -1628AA in the p38β promoter region due to the SNP. Therefore, this allelic variant may be a genetic modifier for CRC susceptibility. D.A. Spandidos 2013-07 2013-05-08 /pmc/articles/PMC3742754/ /pubmed/23946768 http://dx.doi.org/10.3892/ol.2013.1334 Text en Copyright © 2013, Spandidos Publications http://creativecommons.org/licenses/by/3.0 This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Articles
HUANG, QINGHUA
CHEN, DIANKE
SONG, SHUNXIN
FU, XINHUI
WEI, YISHENG
LU, JIACHUN
WANG, LEI
WANG, JIANPING
A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
title A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
title_full A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
title_fullStr A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
title_full_unstemmed A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
title_short A genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
title_sort genetic variation of the p38β promoter region is correlated with an increased risk of sporadic colorectal cancer
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3742754/
https://www.ncbi.nlm.nih.gov/pubmed/23946768
http://dx.doi.org/10.3892/ol.2013.1334
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