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Effects of bursty protein production on the noisy oscillatory properties of downstream pathways

Experiments show that proteins are translated in sharp bursts; similar bursty phenomena have been observed for protein import into compartments. Here we investigate the effect of burstiness in protein expression and import on the stochastic properties of downstream pathways. We consider two identica...

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Detalles Bibliográficos
Autores principales: Toner, D. L. K., Grima, R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743060/
https://www.ncbi.nlm.nih.gov/pubmed/23942456
http://dx.doi.org/10.1038/srep02438
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author Toner, D. L. K.
Grima, R.
author_facet Toner, D. L. K.
Grima, R.
author_sort Toner, D. L. K.
collection PubMed
description Experiments show that proteins are translated in sharp bursts; similar bursty phenomena have been observed for protein import into compartments. Here we investigate the effect of burstiness in protein expression and import on the stochastic properties of downstream pathways. We consider two identical pathways with equal mean input rates, except in one pathway proteins are input one at a time and in the other proteins are input in bursts. Deterministically the dynamics of these two pathways are indistinguishable. However the stochastic behavior falls in three categories: (i) both pathways display or do not display noise-induced oscillations; (ii) the non-bursty input pathway displays noise-induced oscillations whereas the bursty one does not; (iii) the reverse of (ii). We derive necessary conditions for these three cases to classify systems involving autocatalysis, trimerization and genetic feedback loops. Our results suggest that single cell rhythms can be controlled by regulation of burstiness in protein production.
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spelling pubmed-37430602013-08-14 Effects of bursty protein production on the noisy oscillatory properties of downstream pathways Toner, D. L. K. Grima, R. Sci Rep Article Experiments show that proteins are translated in sharp bursts; similar bursty phenomena have been observed for protein import into compartments. Here we investigate the effect of burstiness in protein expression and import on the stochastic properties of downstream pathways. We consider two identical pathways with equal mean input rates, except in one pathway proteins are input one at a time and in the other proteins are input in bursts. Deterministically the dynamics of these two pathways are indistinguishable. However the stochastic behavior falls in three categories: (i) both pathways display or do not display noise-induced oscillations; (ii) the non-bursty input pathway displays noise-induced oscillations whereas the bursty one does not; (iii) the reverse of (ii). We derive necessary conditions for these three cases to classify systems involving autocatalysis, trimerization and genetic feedback loops. Our results suggest that single cell rhythms can be controlled by regulation of burstiness in protein production. Nature Publishing Group 2013-08-14 /pmc/articles/PMC3743060/ /pubmed/23942456 http://dx.doi.org/10.1038/srep02438 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/
spellingShingle Article
Toner, D. L. K.
Grima, R.
Effects of bursty protein production on the noisy oscillatory properties of downstream pathways
title Effects of bursty protein production on the noisy oscillatory properties of downstream pathways
title_full Effects of bursty protein production on the noisy oscillatory properties of downstream pathways
title_fullStr Effects of bursty protein production on the noisy oscillatory properties of downstream pathways
title_full_unstemmed Effects of bursty protein production on the noisy oscillatory properties of downstream pathways
title_short Effects of bursty protein production on the noisy oscillatory properties of downstream pathways
title_sort effects of bursty protein production on the noisy oscillatory properties of downstream pathways
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743060/
https://www.ncbi.nlm.nih.gov/pubmed/23942456
http://dx.doi.org/10.1038/srep02438
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