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Functional genomics of Plasmodium falciparum using metabolic modelling and analysis

Plasmodium falciparum is an obligate intracellular parasite and the leading cause of severe malaria responsible for tremendous morbidity and mortality particularly in sub-Saharan Africa. Successful completion of the P. falciparum genome sequencing project in 2002 provided a comprehensive foundation...

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Autores principales: Tymoshenko, Stepan, Oppenheim, Rebecca D., Soldati-Favre, Dominique, Hatzimanikatis, Vassily
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743259/
https://www.ncbi.nlm.nih.gov/pubmed/23793264
http://dx.doi.org/10.1093/bfgp/elt017
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author Tymoshenko, Stepan
Oppenheim, Rebecca D.
Soldati-Favre, Dominique
Hatzimanikatis, Vassily
author_facet Tymoshenko, Stepan
Oppenheim, Rebecca D.
Soldati-Favre, Dominique
Hatzimanikatis, Vassily
author_sort Tymoshenko, Stepan
collection PubMed
description Plasmodium falciparum is an obligate intracellular parasite and the leading cause of severe malaria responsible for tremendous morbidity and mortality particularly in sub-Saharan Africa. Successful completion of the P. falciparum genome sequencing project in 2002 provided a comprehensive foundation for functional genomic studies on this pathogen in the following decade. Over this period, a large spectrum of experimental approaches has been deployed to improve and expand the scope of functionally annotated genes. Meanwhile, rapidly evolving methods of systems biology have also begun to contribute to a more global understanding of various aspects of the biology and pathogenesis of malaria. Herein we provide an overview on metabolic modelling, which has the capability to integrate information from functional genomics studies in P. falciparum and guide future malaria research efforts towards the identification of novel candidate drug targets.
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spelling pubmed-37432592013-08-14 Functional genomics of Plasmodium falciparum using metabolic modelling and analysis Tymoshenko, Stepan Oppenheim, Rebecca D. Soldati-Favre, Dominique Hatzimanikatis, Vassily Brief Funct Genomics Papers Plasmodium falciparum is an obligate intracellular parasite and the leading cause of severe malaria responsible for tremendous morbidity and mortality particularly in sub-Saharan Africa. Successful completion of the P. falciparum genome sequencing project in 2002 provided a comprehensive foundation for functional genomic studies on this pathogen in the following decade. Over this period, a large spectrum of experimental approaches has been deployed to improve and expand the scope of functionally annotated genes. Meanwhile, rapidly evolving methods of systems biology have also begun to contribute to a more global understanding of various aspects of the biology and pathogenesis of malaria. Herein we provide an overview on metabolic modelling, which has the capability to integrate information from functional genomics studies in P. falciparum and guide future malaria research efforts towards the identification of novel candidate drug targets. Oxford University Press 2013-07 2013-06-22 /pmc/articles/PMC3743259/ /pubmed/23793264 http://dx.doi.org/10.1093/bfgp/elt017 Text en © The Author 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Papers
Tymoshenko, Stepan
Oppenheim, Rebecca D.
Soldati-Favre, Dominique
Hatzimanikatis, Vassily
Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
title Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
title_full Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
title_fullStr Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
title_full_unstemmed Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
title_short Functional genomics of Plasmodium falciparum using metabolic modelling and analysis
title_sort functional genomics of plasmodium falciparum using metabolic modelling and analysis
topic Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743259/
https://www.ncbi.nlm.nih.gov/pubmed/23793264
http://dx.doi.org/10.1093/bfgp/elt017
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