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Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma

OBJECTIVE: Single nucleotide polymorphisms (SNPs) accumulated frequently in the mitochondrial displacement loop (D-loop) in many cancers. We had identified cancer risk-associated SNPs in the D-loop of non-Hodgkin lymphoma (NHL) patients previously, in this study, we investigated the association of a...

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Autores principales: Fan, Haiyan, Wang, Cuiju, Guo, Zhanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove Medical Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743528/
https://www.ncbi.nlm.nih.gov/pubmed/23966792
http://dx.doi.org/10.2147/OTT.S49597
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author Fan, Haiyan
Wang, Cuiju
Guo, Zhanjun
author_facet Fan, Haiyan
Wang, Cuiju
Guo, Zhanjun
author_sort Fan, Haiyan
collection PubMed
description OBJECTIVE: Single nucleotide polymorphisms (SNPs) accumulated frequently in the mitochondrial displacement loop (D-loop) in many cancers. We had identified cancer risk-associated SNPs in the D-loop of non-Hodgkin lymphoma (NHL) patients previously, in this study, we investigated the association of age at onset and D-loop SNPs in NHL patients. MATERIALS AND METHODS: The D-loop region of mtDNA was sequenced for 133 NHL patients recorded at the Fourth Hospital of Hebei Medical University. The Kaplan–Meier method was used to identify age at onset-associated SNPs in the D-loop of NHL patients. The Cox proportional hazards model was used to identify independent risk factors for age at onset. RESULTS: The SNP sites of nucleotides 146C/T, 151T/C, 194T/C, 315C/C insert, 523Del/A, and 525Del/C were identified for their association with age at onset, by the logrank test. In an overall multivariate analysis, allele 146 (relative risk, 0.403; 95% confidence interval [CI]: 0.182–0.895) (P = 0.026), allele 151 (relative risk, 0.378; 95% CI: 0.165–0.868) (P = 0.022), and allele 315 (relative risk, 3.554; 95% CI: 1.344–9.400) (P = 0.011) were identified as independent predictors for age at onset in NHL patients. CONCLUSION: SNPs in the D-loop can predict age at onset in NHL patients. Analysis of the D-loop SNPs can help identify NHL patient subgroups at high risk of early onset.
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spelling pubmed-37435282013-08-21 Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma Fan, Haiyan Wang, Cuiju Guo, Zhanjun Onco Targets Ther Original Research OBJECTIVE: Single nucleotide polymorphisms (SNPs) accumulated frequently in the mitochondrial displacement loop (D-loop) in many cancers. We had identified cancer risk-associated SNPs in the D-loop of non-Hodgkin lymphoma (NHL) patients previously, in this study, we investigated the association of age at onset and D-loop SNPs in NHL patients. MATERIALS AND METHODS: The D-loop region of mtDNA was sequenced for 133 NHL patients recorded at the Fourth Hospital of Hebei Medical University. The Kaplan–Meier method was used to identify age at onset-associated SNPs in the D-loop of NHL patients. The Cox proportional hazards model was used to identify independent risk factors for age at onset. RESULTS: The SNP sites of nucleotides 146C/T, 151T/C, 194T/C, 315C/C insert, 523Del/A, and 525Del/C were identified for their association with age at onset, by the logrank test. In an overall multivariate analysis, allele 146 (relative risk, 0.403; 95% confidence interval [CI]: 0.182–0.895) (P = 0.026), allele 151 (relative risk, 0.378; 95% CI: 0.165–0.868) (P = 0.022), and allele 315 (relative risk, 3.554; 95% CI: 1.344–9.400) (P = 0.011) were identified as independent predictors for age at onset in NHL patients. CONCLUSION: SNPs in the D-loop can predict age at onset in NHL patients. Analysis of the D-loop SNPs can help identify NHL patient subgroups at high risk of early onset. Dove Medical Press 2013-08-02 /pmc/articles/PMC3743528/ /pubmed/23966792 http://dx.doi.org/10.2147/OTT.S49597 Text en © 2013 Fan et al. This work is published by Dove Medical Press Ltd, and licensed under Creative Commons Attribution – Non Commercial (unported, v3.0) License. The full terms of the License are available at http://creativecommons.org/licenses/by-nc/3.0/. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Ltd, provided the work is properly attributed.
spellingShingle Original Research
Fan, Haiyan
Wang, Cuiju
Guo, Zhanjun
Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
title Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
title_full Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
title_fullStr Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
title_full_unstemmed Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
title_short Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
title_sort single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-hodgkin lymphoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743528/
https://www.ncbi.nlm.nih.gov/pubmed/23966792
http://dx.doi.org/10.2147/OTT.S49597
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