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Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma
OBJECTIVE: Single nucleotide polymorphisms (SNPs) accumulated frequently in the mitochondrial displacement loop (D-loop) in many cancers. We had identified cancer risk-associated SNPs in the D-loop of non-Hodgkin lymphoma (NHL) patients previously, in this study, we investigated the association of a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Dove Medical Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743528/ https://www.ncbi.nlm.nih.gov/pubmed/23966792 http://dx.doi.org/10.2147/OTT.S49597 |
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author | Fan, Haiyan Wang, Cuiju Guo, Zhanjun |
author_facet | Fan, Haiyan Wang, Cuiju Guo, Zhanjun |
author_sort | Fan, Haiyan |
collection | PubMed |
description | OBJECTIVE: Single nucleotide polymorphisms (SNPs) accumulated frequently in the mitochondrial displacement loop (D-loop) in many cancers. We had identified cancer risk-associated SNPs in the D-loop of non-Hodgkin lymphoma (NHL) patients previously, in this study, we investigated the association of age at onset and D-loop SNPs in NHL patients. MATERIALS AND METHODS: The D-loop region of mtDNA was sequenced for 133 NHL patients recorded at the Fourth Hospital of Hebei Medical University. The Kaplan–Meier method was used to identify age at onset-associated SNPs in the D-loop of NHL patients. The Cox proportional hazards model was used to identify independent risk factors for age at onset. RESULTS: The SNP sites of nucleotides 146C/T, 151T/C, 194T/C, 315C/C insert, 523Del/A, and 525Del/C were identified for their association with age at onset, by the logrank test. In an overall multivariate analysis, allele 146 (relative risk, 0.403; 95% confidence interval [CI]: 0.182–0.895) (P = 0.026), allele 151 (relative risk, 0.378; 95% CI: 0.165–0.868) (P = 0.022), and allele 315 (relative risk, 3.554; 95% CI: 1.344–9.400) (P = 0.011) were identified as independent predictors for age at onset in NHL patients. CONCLUSION: SNPs in the D-loop can predict age at onset in NHL patients. Analysis of the D-loop SNPs can help identify NHL patient subgroups at high risk of early onset. |
format | Online Article Text |
id | pubmed-3743528 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Dove Medical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-37435282013-08-21 Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma Fan, Haiyan Wang, Cuiju Guo, Zhanjun Onco Targets Ther Original Research OBJECTIVE: Single nucleotide polymorphisms (SNPs) accumulated frequently in the mitochondrial displacement loop (D-loop) in many cancers. We had identified cancer risk-associated SNPs in the D-loop of non-Hodgkin lymphoma (NHL) patients previously, in this study, we investigated the association of age at onset and D-loop SNPs in NHL patients. MATERIALS AND METHODS: The D-loop region of mtDNA was sequenced for 133 NHL patients recorded at the Fourth Hospital of Hebei Medical University. The Kaplan–Meier method was used to identify age at onset-associated SNPs in the D-loop of NHL patients. The Cox proportional hazards model was used to identify independent risk factors for age at onset. RESULTS: The SNP sites of nucleotides 146C/T, 151T/C, 194T/C, 315C/C insert, 523Del/A, and 525Del/C were identified for their association with age at onset, by the logrank test. In an overall multivariate analysis, allele 146 (relative risk, 0.403; 95% confidence interval [CI]: 0.182–0.895) (P = 0.026), allele 151 (relative risk, 0.378; 95% CI: 0.165–0.868) (P = 0.022), and allele 315 (relative risk, 3.554; 95% CI: 1.344–9.400) (P = 0.011) were identified as independent predictors for age at onset in NHL patients. CONCLUSION: SNPs in the D-loop can predict age at onset in NHL patients. Analysis of the D-loop SNPs can help identify NHL patient subgroups at high risk of early onset. Dove Medical Press 2013-08-02 /pmc/articles/PMC3743528/ /pubmed/23966792 http://dx.doi.org/10.2147/OTT.S49597 Text en © 2013 Fan et al. This work is published by Dove Medical Press Ltd, and licensed under Creative Commons Attribution – Non Commercial (unported, v3.0) License. The full terms of the License are available at http://creativecommons.org/licenses/by-nc/3.0/. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Ltd, provided the work is properly attributed. |
spellingShingle | Original Research Fan, Haiyan Wang, Cuiju Guo, Zhanjun Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma |
title | Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma |
title_full | Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma |
title_fullStr | Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma |
title_full_unstemmed | Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma |
title_short | Single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-Hodgkin lymphoma |
title_sort | single nucleotide polymorphisms in the mitochondrial displacement loop and age at onset of non-hodgkin lymphoma |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743528/ https://www.ncbi.nlm.nih.gov/pubmed/23966792 http://dx.doi.org/10.2147/OTT.S49597 |
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