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The Influence of Relatives on the Efficiency and Error Rate of Familial Searching

We investigate the consequences of adopting the criteria used by the state of California, as described by Myers et al. (2011), for conducting familial searches. We carried out a simulation study of randomly generated profiles of related and unrelated individuals with 13-locus CODIS genotypes and YFi...

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Autores principales: Rohlfs, Rori V., Murphy, Erin, Song, Yun S., Slatkin, Montgomery
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743829/
https://www.ncbi.nlm.nih.gov/pubmed/23967076
http://dx.doi.org/10.1371/journal.pone.0070495
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author Rohlfs, Rori V.
Murphy, Erin
Song, Yun S.
Slatkin, Montgomery
author_facet Rohlfs, Rori V.
Murphy, Erin
Song, Yun S.
Slatkin, Montgomery
author_sort Rohlfs, Rori V.
collection PubMed
description We investigate the consequences of adopting the criteria used by the state of California, as described by Myers et al. (2011), for conducting familial searches. We carried out a simulation study of randomly generated profiles of related and unrelated individuals with 13-locus CODIS genotypes and YFiler® Y-chromosome haplotypes, on which the Myers protocol for relative identification was carried out. For Y-chromosome sharing first degree relatives, the Myers protocol has a high probability ([Image: see text]) of identifying their relationship. For unrelated individuals, there is a low probability that an unrelated person in the database will be identified as a first-degree relative. For more distant Y-haplotype sharing relatives (half-siblings, first cousins, half-first cousins or second cousins) there is a substantial probability that the more distant relative will be incorrectly identified as a first-degree relative. For example, there is a [Image: see text] probability that a first cousin will be identified as a full sibling, with the probability depending on the population background. Although the California familial search policy is likely to identify a first degree relative if his profile is in the database, and it poses little risk of falsely identifying an unrelated individual in a database as a first-degree relative, there is a substantial risk of falsely identifying a more distant Y-haplotype sharing relative in the database as a first-degree relative, with the consequence that their immediate family may become the target for further investigation. This risk falls disproportionately on those ethnic groups that are currently overrepresented in state and federal databases.
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spelling pubmed-37438292013-08-21 The Influence of Relatives on the Efficiency and Error Rate of Familial Searching Rohlfs, Rori V. Murphy, Erin Song, Yun S. Slatkin, Montgomery PLoS One Research Article We investigate the consequences of adopting the criteria used by the state of California, as described by Myers et al. (2011), for conducting familial searches. We carried out a simulation study of randomly generated profiles of related and unrelated individuals with 13-locus CODIS genotypes and YFiler® Y-chromosome haplotypes, on which the Myers protocol for relative identification was carried out. For Y-chromosome sharing first degree relatives, the Myers protocol has a high probability ([Image: see text]) of identifying their relationship. For unrelated individuals, there is a low probability that an unrelated person in the database will be identified as a first-degree relative. For more distant Y-haplotype sharing relatives (half-siblings, first cousins, half-first cousins or second cousins) there is a substantial probability that the more distant relative will be incorrectly identified as a first-degree relative. For example, there is a [Image: see text] probability that a first cousin will be identified as a full sibling, with the probability depending on the population background. Although the California familial search policy is likely to identify a first degree relative if his profile is in the database, and it poses little risk of falsely identifying an unrelated individual in a database as a first-degree relative, there is a substantial risk of falsely identifying a more distant Y-haplotype sharing relative in the database as a first-degree relative, with the consequence that their immediate family may become the target for further investigation. This risk falls disproportionately on those ethnic groups that are currently overrepresented in state and federal databases. Public Library of Science 2013-08-14 /pmc/articles/PMC3743829/ /pubmed/23967076 http://dx.doi.org/10.1371/journal.pone.0070495 Text en © 2013 Rohlfs et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Rohlfs, Rori V.
Murphy, Erin
Song, Yun S.
Slatkin, Montgomery
The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
title The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
title_full The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
title_fullStr The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
title_full_unstemmed The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
title_short The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
title_sort influence of relatives on the efficiency and error rate of familial searching
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3743829/
https://www.ncbi.nlm.nih.gov/pubmed/23967076
http://dx.doi.org/10.1371/journal.pone.0070495
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