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Classification of schizophrenia patients based on resting-state functional network connectivity
There is a growing interest in automatic classification of mental disorders based on neuroimaging data. Small training data sets (subjects) and very large amount of high dimensional data make it a challenging task to design robust and accurate classifiers for heterogeneous disorders such as schizoph...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3744823/ https://www.ncbi.nlm.nih.gov/pubmed/23966903 http://dx.doi.org/10.3389/fnins.2013.00133 |
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author | Arbabshirani, Mohammad R. Kiehl, Kent A. Pearlson, Godfrey D. Calhoun, Vince D. |
author_facet | Arbabshirani, Mohammad R. Kiehl, Kent A. Pearlson, Godfrey D. Calhoun, Vince D. |
author_sort | Arbabshirani, Mohammad R. |
collection | PubMed |
description | There is a growing interest in automatic classification of mental disorders based on neuroimaging data. Small training data sets (subjects) and very large amount of high dimensional data make it a challenging task to design robust and accurate classifiers for heterogeneous disorders such as schizophrenia. Most previous studies considered structural MRI, diffusion tensor imaging and task-based fMRI for this purpose. However, resting-state data has been rarely used in discrimination of schizophrenia patients from healthy controls. Resting data are of great interest, since they are relatively easy to collect, and not confounded by behavioral performance on a task. Several linear and non-linear classification methods were trained using a training dataset and evaluate with a separate testing dataset. Results show that classification with high accuracy is achievable using simple non-linear discriminative methods such as k-nearest neighbors (KNNs) which is very promising. We compare and report detailed results of each classifier as well as statistical analysis and evaluation of each single feature. To our knowledge our effects represent the first use of resting-state functional network connectivity (FNC) features to classify schizophrenia. |
format | Online Article Text |
id | pubmed-3744823 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-37448232013-08-21 Classification of schizophrenia patients based on resting-state functional network connectivity Arbabshirani, Mohammad R. Kiehl, Kent A. Pearlson, Godfrey D. Calhoun, Vince D. Front Neurosci Neuroscience There is a growing interest in automatic classification of mental disorders based on neuroimaging data. Small training data sets (subjects) and very large amount of high dimensional data make it a challenging task to design robust and accurate classifiers for heterogeneous disorders such as schizophrenia. Most previous studies considered structural MRI, diffusion tensor imaging and task-based fMRI for this purpose. However, resting-state data has been rarely used in discrimination of schizophrenia patients from healthy controls. Resting data are of great interest, since they are relatively easy to collect, and not confounded by behavioral performance on a task. Several linear and non-linear classification methods were trained using a training dataset and evaluate with a separate testing dataset. Results show that classification with high accuracy is achievable using simple non-linear discriminative methods such as k-nearest neighbors (KNNs) which is very promising. We compare and report detailed results of each classifier as well as statistical analysis and evaluation of each single feature. To our knowledge our effects represent the first use of resting-state functional network connectivity (FNC) features to classify schizophrenia. Frontiers Media S.A. 2013-07-30 /pmc/articles/PMC3744823/ /pubmed/23966903 http://dx.doi.org/10.3389/fnins.2013.00133 Text en Copyright © 2013 Arbabshirani, Kiehl, Pearlson and Calhoun. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Arbabshirani, Mohammad R. Kiehl, Kent A. Pearlson, Godfrey D. Calhoun, Vince D. Classification of schizophrenia patients based on resting-state functional network connectivity |
title | Classification of schizophrenia patients based on resting-state functional network connectivity |
title_full | Classification of schizophrenia patients based on resting-state functional network connectivity |
title_fullStr | Classification of schizophrenia patients based on resting-state functional network connectivity |
title_full_unstemmed | Classification of schizophrenia patients based on resting-state functional network connectivity |
title_short | Classification of schizophrenia patients based on resting-state functional network connectivity |
title_sort | classification of schizophrenia patients based on resting-state functional network connectivity |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3744823/ https://www.ncbi.nlm.nih.gov/pubmed/23966903 http://dx.doi.org/10.3389/fnins.2013.00133 |
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