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Computational Analysis of N-acetyl transferase in Tribolium castaneum

N-acetyl transferase (NAT) is responsible to catalyze the transfer of acetyl groups to arylamines from acetyl-CoA. Aralkylamine Nacetyl transferase (AANAT), which belongs to GCN5-related N-acetyl transferase member, is a globular 23-kDa cytosolic protein that forms a reversible regulatory complex wi...

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Autores principales: Singh, Kailash, Mishra, Vineet Kumar, Nath, Karabi, Rashid, Naira, Parveen, Farzana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746093/
https://www.ncbi.nlm.nih.gov/pubmed/23976826
http://dx.doi.org/10.6026/97320630009715
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author Singh, Kailash
Mishra, Vineet Kumar
Nath, Karabi
Rashid, Naira
Parveen, Farzana
author_facet Singh, Kailash
Mishra, Vineet Kumar
Nath, Karabi
Rashid, Naira
Parveen, Farzana
author_sort Singh, Kailash
collection PubMed
description N-acetyl transferase (NAT) is responsible to catalyze the transfer of acetyl groups to arylamines from acetyl-CoA. Aralkylamine Nacetyl transferase (AANAT), which belongs to GCN5-related N-acetyl transferase member, is a globular 23-kDa cytosolic protein that forms a reversible regulatory complex with 14-3-3 proteins, AANAT regulates the daily cycle of melatonin biosynthesis in mammals, making it an attractive target for therapeutic control of abnormal melatonin production in mood and sleep disorders. There is no evidence available regarding α and β subunits, active site and their ASA value in Dopamine N-acetyl transferase. Therefore, we describe the development of Dopamine N-acetyl transferase model in Tribolium castaneum. We further document the predicted active sites in the structural model with solvent exposed ASA residues. During this study, the model was built by CPH program and validated through PROCHECK, Verify 3D, ERRAT and ProSA for reliability. The active sites were predicted in the model with further ASA analysis of active site residues. The discussed information thus provides insight to the predicted active site and ASA values of Dopamine N-acetyl transferase model in Tribolium castaneum.
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spelling pubmed-37460932013-08-23 Computational Analysis of N-acetyl transferase in Tribolium castaneum Singh, Kailash Mishra, Vineet Kumar Nath, Karabi Rashid, Naira Parveen, Farzana Bioinformation Hypothesis N-acetyl transferase (NAT) is responsible to catalyze the transfer of acetyl groups to arylamines from acetyl-CoA. Aralkylamine Nacetyl transferase (AANAT), which belongs to GCN5-related N-acetyl transferase member, is a globular 23-kDa cytosolic protein that forms a reversible regulatory complex with 14-3-3 proteins, AANAT regulates the daily cycle of melatonin biosynthesis in mammals, making it an attractive target for therapeutic control of abnormal melatonin production in mood and sleep disorders. There is no evidence available regarding α and β subunits, active site and their ASA value in Dopamine N-acetyl transferase. Therefore, we describe the development of Dopamine N-acetyl transferase model in Tribolium castaneum. We further document the predicted active sites in the structural model with solvent exposed ASA residues. During this study, the model was built by CPH program and validated through PROCHECK, Verify 3D, ERRAT and ProSA for reliability. The active sites were predicted in the model with further ASA analysis of active site residues. The discussed information thus provides insight to the predicted active site and ASA values of Dopamine N-acetyl transferase model in Tribolium castaneum. Biomedical Informatics 2013-08-07 /pmc/articles/PMC3746093/ /pubmed/23976826 http://dx.doi.org/10.6026/97320630009715 Text en © 2013 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Singh, Kailash
Mishra, Vineet Kumar
Nath, Karabi
Rashid, Naira
Parveen, Farzana
Computational Analysis of N-acetyl transferase in Tribolium castaneum
title Computational Analysis of N-acetyl transferase in Tribolium castaneum
title_full Computational Analysis of N-acetyl transferase in Tribolium castaneum
title_fullStr Computational Analysis of N-acetyl transferase in Tribolium castaneum
title_full_unstemmed Computational Analysis of N-acetyl transferase in Tribolium castaneum
title_short Computational Analysis of N-acetyl transferase in Tribolium castaneum
title_sort computational analysis of n-acetyl transferase in tribolium castaneum
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746093/
https://www.ncbi.nlm.nih.gov/pubmed/23976826
http://dx.doi.org/10.6026/97320630009715
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