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Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking
We report a non-iterative localization algorithm that utilizes the scaling of a three-dimensional (3D) image in the axial direction and focuses on evaluating the radial symmetry center of the scaled image to achieve the desired single-particle localization. Using this approach, we analyzed simulated...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746204/ https://www.ncbi.nlm.nih.gov/pubmed/23955270 http://dx.doi.org/10.1038/srep02462 |
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author | Liu, Shu-Lin Li, Jicun Zhang, Zhi-Ling Wang, Zhi-Gang Tian, Zhi-Quan Wang, Guo-Ping Pang, Dai-Wen |
author_facet | Liu, Shu-Lin Li, Jicun Zhang, Zhi-Ling Wang, Zhi-Gang Tian, Zhi-Quan Wang, Guo-Ping Pang, Dai-Wen |
author_sort | Liu, Shu-Lin |
collection | PubMed |
description | We report a non-iterative localization algorithm that utilizes the scaling of a three-dimensional (3D) image in the axial direction and focuses on evaluating the radial symmetry center of the scaled image to achieve the desired single-particle localization. Using this approach, we analyzed simulated 3D particle images by wide-field microscopy and confocal microscopy respectively, and the 3D trajectory of quantum dots (QDs)-labeled influenza virus in live cells. Both applications indicate that the method can achieve 3D single-particle localization with a sub-pixel precision and sub-millisecond computation time. The precision is almost the same as that of the iterative nonlinear least-squares 3D Gaussian fitting method, but with two orders of magnitude higher computation speed. This approach can reduce considerably the time and costs for processing the large volume data of 3D images for 3D single-particle tracking, which is especially suited for 3D high-precision single-particle tracking, 3D single-molecule imaging and even new microscopy techniques. |
format | Online Article Text |
id | pubmed-3746204 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-37462042013-08-19 Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking Liu, Shu-Lin Li, Jicun Zhang, Zhi-Ling Wang, Zhi-Gang Tian, Zhi-Quan Wang, Guo-Ping Pang, Dai-Wen Sci Rep Article We report a non-iterative localization algorithm that utilizes the scaling of a three-dimensional (3D) image in the axial direction and focuses on evaluating the radial symmetry center of the scaled image to achieve the desired single-particle localization. Using this approach, we analyzed simulated 3D particle images by wide-field microscopy and confocal microscopy respectively, and the 3D trajectory of quantum dots (QDs)-labeled influenza virus in live cells. Both applications indicate that the method can achieve 3D single-particle localization with a sub-pixel precision and sub-millisecond computation time. The precision is almost the same as that of the iterative nonlinear least-squares 3D Gaussian fitting method, but with two orders of magnitude higher computation speed. This approach can reduce considerably the time and costs for processing the large volume data of 3D images for 3D single-particle tracking, which is especially suited for 3D high-precision single-particle tracking, 3D single-molecule imaging and even new microscopy techniques. Nature Publishing Group 2013-08-19 /pmc/articles/PMC3746204/ /pubmed/23955270 http://dx.doi.org/10.1038/srep02462 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by/3.0/ This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Article Liu, Shu-Lin Li, Jicun Zhang, Zhi-Ling Wang, Zhi-Gang Tian, Zhi-Quan Wang, Guo-Ping Pang, Dai-Wen Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking |
title | Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking |
title_full | Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking |
title_fullStr | Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking |
title_full_unstemmed | Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking |
title_short | Fast and High-Accuracy Localization for Three-Dimensional Single-Particle Tracking |
title_sort | fast and high-accuracy localization for three-dimensional single-particle tracking |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746204/ https://www.ncbi.nlm.nih.gov/pubmed/23955270 http://dx.doi.org/10.1038/srep02462 |
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