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Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))

Salinicoccus carnicancri Jung et al. 2010 belongs to the genus Salinicoccus in the family Staphylococcaceae. Members of the Salinicoccus are moderately halophilic and originate from various salty environments. The halophilic features of the Salinicoccus suggest their possible uses in biotechnologica...

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Autores principales: Hyun, Dong-Wook, Whon, Tae Woong, Cho, Yong-Joon, Chun, Jongsik, Kim, Min-Soo, Jung, Mi-Ja, Shin, Na-Ri, Kim, Joon-Yong, Kim, Pil Soo, Yun, Ji-Hyun, Lee, Jina, Oh, Sei Joon, Bae, Jin-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746416/
https://www.ncbi.nlm.nih.gov/pubmed/23991257
http://dx.doi.org/10.4056/sigs.3967649
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author Hyun, Dong-Wook
Whon, Tae Woong
Cho, Yong-Joon
Chun, Jongsik
Kim, Min-Soo
Jung, Mi-Ja
Shin, Na-Ri
Kim, Joon-Yong
Kim, Pil Soo
Yun, Ji-Hyun
Lee, Jina
Oh, Sei Joon
Bae, Jin-Woo
author_facet Hyun, Dong-Wook
Whon, Tae Woong
Cho, Yong-Joon
Chun, Jongsik
Kim, Min-Soo
Jung, Mi-Ja
Shin, Na-Ri
Kim, Joon-Yong
Kim, Pil Soo
Yun, Ji-Hyun
Lee, Jina
Oh, Sei Joon
Bae, Jin-Woo
author_sort Hyun, Dong-Wook
collection PubMed
description Salinicoccus carnicancri Jung et al. 2010 belongs to the genus Salinicoccus in the family Staphylococcaceae. Members of the Salinicoccus are moderately halophilic and originate from various salty environments. The halophilic features of the Salinicoccus suggest their possible uses in biotechnological applications, such as biodegradation and fermented food production. However, the genus Salinicoccus is poorly characterized at the genome level, despite its potential importance. This study presents the draft genome sequence of S. carnicancri strain Crm(T) and its annotation. The 2,673,309 base pair genome contained 2,700 protein-coding genes and 78 RNA genes with an average G+C content of 47.93 mol%. It was notable that the strain carried 72 predicted genes associated with osmoregulation, which suggests the presence of beneficial functions that facilitate growth in high-salt environments.
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spelling pubmed-37464162013-08-29 Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T)) Hyun, Dong-Wook Whon, Tae Woong Cho, Yong-Joon Chun, Jongsik Kim, Min-Soo Jung, Mi-Ja Shin, Na-Ri Kim, Joon-Yong Kim, Pil Soo Yun, Ji-Hyun Lee, Jina Oh, Sei Joon Bae, Jin-Woo Stand Genomic Sci Short Genome Reports Salinicoccus carnicancri Jung et al. 2010 belongs to the genus Salinicoccus in the family Staphylococcaceae. Members of the Salinicoccus are moderately halophilic and originate from various salty environments. The halophilic features of the Salinicoccus suggest their possible uses in biotechnological applications, such as biodegradation and fermented food production. However, the genus Salinicoccus is poorly characterized at the genome level, despite its potential importance. This study presents the draft genome sequence of S. carnicancri strain Crm(T) and its annotation. The 2,673,309 base pair genome contained 2,700 protein-coding genes and 78 RNA genes with an average G+C content of 47.93 mol%. It was notable that the strain carried 72 predicted genes associated with osmoregulation, which suggests the presence of beneficial functions that facilitate growth in high-salt environments. Michigan State University 2013-06-03 /pmc/articles/PMC3746416/ /pubmed/23991257 http://dx.doi.org/10.4056/sigs.3967649 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Hyun, Dong-Wook
Whon, Tae Woong
Cho, Yong-Joon
Chun, Jongsik
Kim, Min-Soo
Jung, Mi-Ja
Shin, Na-Ri
Kim, Joon-Yong
Kim, Pil Soo
Yun, Ji-Hyun
Lee, Jina
Oh, Sei Joon
Bae, Jin-Woo
Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))
title Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))
title_full Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))
title_fullStr Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))
title_full_unstemmed Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))
title_short Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T))
title_sort genome sequence of the moderately halophilic bacterium salinicoccus carnicancri type strain crm(t) (= dsm 23852(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746416/
https://www.ncbi.nlm.nih.gov/pubmed/23991257
http://dx.doi.org/10.4056/sigs.3967649
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