Cargando…
Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T))
Leptonema illini Hovind-Hougen 1979 is the type species of the genus Leptonema, family Leptospiraceae, phylum Spirochaetes. Organisms of this family have a Gram-negative-like cell envelope consisting of a cytoplasmic membrane and an outer membrane. The peptidoglycan layer is associated with the cyto...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746420/ https://www.ncbi.nlm.nih.gov/pubmed/23991250 http://dx.doi.org/10.4056/sigs.3637201 |
_version_ | 1782280821173911552 |
---|---|
author | Huntemann, Marcel Stackebrandt, Erko Held, Brittany Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Rohde, Manfred Gronow, Sabine Göker, Markus Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Woyke, Tanja Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_facet | Huntemann, Marcel Stackebrandt, Erko Held, Brittany Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Rohde, Manfred Gronow, Sabine Göker, Markus Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Woyke, Tanja Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_sort | Huntemann, Marcel |
collection | PubMed |
description | Leptonema illini Hovind-Hougen 1979 is the type species of the genus Leptonema, family Leptospiraceae, phylum Spirochaetes. Organisms of this family have a Gram-negative-like cell envelope consisting of a cytoplasmic membrane and an outer membrane. The peptidoglycan layer is associated with the cytoplasmic rather than the outer membrane. The two flagella of members of Leptospiraceae extend from the cytoplasmic membrane at the ends of the bacteria into the periplasmic space and are necessary for their motility. Here we describe the features of the L. illini type strain, together with the complete genome sequence, and annotation. This is the first genome sequence (finished at the level of Improved High Quality Draft) to be reported from of a member of the genus Leptonema and a representative of the third genus of the family Leptospiraceae for which complete or draft genome sequences are now available. The three scaffolds of the 4,522,760 bp draft genome sequence reported here, and its 4,230 protein-coding and 47 RNA genes are part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Online Article Text |
id | pubmed-3746420 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-37464202013-08-29 Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) Huntemann, Marcel Stackebrandt, Erko Held, Brittany Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Rohde, Manfred Gronow, Sabine Göker, Markus Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Woyke, Tanja Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Leptonema illini Hovind-Hougen 1979 is the type species of the genus Leptonema, family Leptospiraceae, phylum Spirochaetes. Organisms of this family have a Gram-negative-like cell envelope consisting of a cytoplasmic membrane and an outer membrane. The peptidoglycan layer is associated with the cytoplasmic rather than the outer membrane. The two flagella of members of Leptospiraceae extend from the cytoplasmic membrane at the ends of the bacteria into the periplasmic space and are necessary for their motility. Here we describe the features of the L. illini type strain, together with the complete genome sequence, and annotation. This is the first genome sequence (finished at the level of Improved High Quality Draft) to be reported from of a member of the genus Leptonema and a representative of the third genus of the family Leptospiraceae for which complete or draft genome sequences are now available. The three scaffolds of the 4,522,760 bp draft genome sequence reported here, and its 4,230 protein-coding and 47 RNA genes are part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2013-05-25 /pmc/articles/PMC3746420/ /pubmed/23991250 http://dx.doi.org/10.4056/sigs.3637201 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Huntemann, Marcel Stackebrandt, Erko Held, Brittany Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Goodwin, Lynne A. Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Rohde, Manfred Gronow, Sabine Göker, Markus Detter, John C. Bristow, James Eisen, Jonathan A. Markowitz, Victor Woyke, Tanja Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) |
title | Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) |
title_full | Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) |
title_fullStr | Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) |
title_full_unstemmed | Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) |
title_short | Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)) |
title_sort | genome sequence of the phylogenetically isolated spirochete leptonema illini type strain (3055(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746420/ https://www.ncbi.nlm.nih.gov/pubmed/23991250 http://dx.doi.org/10.4056/sigs.3637201 |
work_keys_str_mv | AT huntemannmarcel genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT stackebrandterko genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT heldbrittany genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT nolanmatt genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT lucassusan genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT hammonnancy genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT deshpandeshweta genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT chengjanfang genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT tapiaroxanne genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT goodwinlynnea genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT pitlucksam genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT liolioskonstantinos genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT paganiioanna genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT ivanovanatalia genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT mavromatiskonstantinos genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT mikhailovanatalia genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT patiamrita genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT chenamy genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT palaniappankrishna genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT landmiriam genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT rohdemanfred genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT gronowsabine genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT gokermarkus genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT detterjohnc genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT bristowjames genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT eisenjonathana genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT markowitzvictor genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT woyketanja genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT hugenholtzphilip genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT kyrpidesnikosc genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT klenkhanspeter genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t AT lapidusalla genomesequenceofthephylogeneticallyisolatedspirocheteleptonemaillinitypestrain3055t |