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Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae

Timonella senegalensis strain JC301(T) gen. nov., sp. nov. is the type strain of T. senegalensis gen. nov., sp. nov., a new species within the newly proposed genus Timonella. This bacterial strain was isolated from the fecal flora of a healthy Senegalese patient. In this report, we detail the featur...

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Autores principales: Mishra, Ajay Kumar, Lagier, Jean-Christophe, Robert, Catherine, Raoult, Didier, Fournier, Pierre-Edouard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746429/
https://www.ncbi.nlm.nih.gov/pubmed/23991262
http://dx.doi.org/10.4056/sigs.3476977
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author Mishra, Ajay Kumar
Lagier, Jean-Christophe
Robert, Catherine
Raoult, Didier
Fournier, Pierre-Edouard
author_facet Mishra, Ajay Kumar
Lagier, Jean-Christophe
Robert, Catherine
Raoult, Didier
Fournier, Pierre-Edouard
author_sort Mishra, Ajay Kumar
collection PubMed
description Timonella senegalensis strain JC301(T) gen. nov., sp. nov. is the type strain of T. senegalensis gen. nov., sp. nov., a new species within the newly proposed genus Timonella. This bacterial strain was isolated from the fecal flora of a healthy Senegalese patient. In this report, we detail the features of this organism, together with the complete genome sequence and annotation. Timonella senegalensis strain JC301(T) exhibits the highest 16S rRNA similarity (95%) with Sanguibacter marinus, the closest validly published bacterial species. The genome of T. senegalensis strain JC301(T) is 3,010,102-bp long, with one chromosome and no plasmid. The genome contains 2,721 protein-coding genes and 72 RNA genes, including 5 rRNA genes. The genomic annotation revealed that T. senegalensis strain JC301(T) possesses the complete complement of enzymes necessary for the de novo biosynthesis of amino acids and vitamins (except for riboflavin and biotin), as well as the enzymes involved in the metabolism of various carbon sources, chaperone genes, and genes involved in the regulation of polyphosphate and glycogen levels.
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spelling pubmed-37464292013-08-29 Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae Mishra, Ajay Kumar Lagier, Jean-Christophe Robert, Catherine Raoult, Didier Fournier, Pierre-Edouard Stand Genomic Sci Short Genome Reports Timonella senegalensis strain JC301(T) gen. nov., sp. nov. is the type strain of T. senegalensis gen. nov., sp. nov., a new species within the newly proposed genus Timonella. This bacterial strain was isolated from the fecal flora of a healthy Senegalese patient. In this report, we detail the features of this organism, together with the complete genome sequence and annotation. Timonella senegalensis strain JC301(T) exhibits the highest 16S rRNA similarity (95%) with Sanguibacter marinus, the closest validly published bacterial species. The genome of T. senegalensis strain JC301(T) is 3,010,102-bp long, with one chromosome and no plasmid. The genome contains 2,721 protein-coding genes and 72 RNA genes, including 5 rRNA genes. The genomic annotation revealed that T. senegalensis strain JC301(T) possesses the complete complement of enzymes necessary for the de novo biosynthesis of amino acids and vitamins (except for riboflavin and biotin), as well as the enzymes involved in the metabolism of various carbon sources, chaperone genes, and genes involved in the regulation of polyphosphate and glycogen levels. Michigan State University 2013-06-13 /pmc/articles/PMC3746429/ /pubmed/23991262 http://dx.doi.org/10.4056/sigs.3476977 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Mishra, Ajay Kumar
Lagier, Jean-Christophe
Robert, Catherine
Raoult, Didier
Fournier, Pierre-Edouard
Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae
title Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae
title_full Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae
title_fullStr Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae
title_full_unstemmed Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae
title_short Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae
title_sort genome sequence and description of timonella senegalensis gen. nov., sp. nov., a new member of the suborder micrococcinae
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746429/
https://www.ncbi.nlm.nih.gov/pubmed/23991262
http://dx.doi.org/10.4056/sigs.3476977
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