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Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures
Graph theoretical approaches have successfully revealed abnormality in brain connectivity, in particular, for contrasting patients from healthy controls. Besides the group comparison analysis, a correlational study is also challenging. In studies with patients, for example, finding brain connections...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3747142/ https://www.ncbi.nlm.nih.gov/pubmed/23977281 http://dx.doi.org/10.1371/journal.pone.0072332 |
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author | Han, Cheol E. Yoo, Sang Wook Seo, Sang Won Na, Duk L. Seong, Joon-Kyung |
author_facet | Han, Cheol E. Yoo, Sang Wook Seo, Sang Won Na, Duk L. Seong, Joon-Kyung |
author_sort | Han, Cheol E. |
collection | PubMed |
description | Graph theoretical approaches have successfully revealed abnormality in brain connectivity, in particular, for contrasting patients from healthy controls. Besides the group comparison analysis, a correlational study is also challenging. In studies with patients, for example, finding brain connections that indeed deepen specific symptoms is interesting. The correlational study is also beneficial since it does not require controls, which are often difficult to find, especially for old-age patients with cognitive impairment where controls could also have cognitive deficits due to normal ageing. However, one of the major difficulties in such correlational studies is too conservative multiple comparison correction. In this paper, we propose a novel method for identifying brain connections that are correlated with a specific cognitive behavior by employing cluster-based statistics, which is less conservative than other methods, such as Bonferroni correction, false discovery rate procedure, and extreme statistics. Our method is based on the insight that multiple brain connections, rather than a single connection, are responsible for abnormal behaviors. Given brain connectivity data, we first compute a partial correlation coefficient between every edge and the behavioral measure. Then we group together neighboring connections with strong correlation into clusters and calculate their maximum sizes. This procedure is repeated for randomly permuted assignments of behavioral measures. Significance levels of the identified sub-networks are estimated from the null distribution of the cluster sizes. This method is independent of network construction methods: either structural or functional network can be used in association with any behavioral measures. We further demonstrated the efficacy of our method using patients with subcortical vascular cognitive impairment. We identified sub-networks that are correlated with the disease severity by exploiting diffusion tensor imaging techniques. The identified sub-networks were consistent with the previous clinical findings having valid significance level, while other methods did not assert any significant findings. |
format | Online Article Text |
id | pubmed-3747142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-37471422013-08-23 Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures Han, Cheol E. Yoo, Sang Wook Seo, Sang Won Na, Duk L. Seong, Joon-Kyung PLoS One Research Article Graph theoretical approaches have successfully revealed abnormality in brain connectivity, in particular, for contrasting patients from healthy controls. Besides the group comparison analysis, a correlational study is also challenging. In studies with patients, for example, finding brain connections that indeed deepen specific symptoms is interesting. The correlational study is also beneficial since it does not require controls, which are often difficult to find, especially for old-age patients with cognitive impairment where controls could also have cognitive deficits due to normal ageing. However, one of the major difficulties in such correlational studies is too conservative multiple comparison correction. In this paper, we propose a novel method for identifying brain connections that are correlated with a specific cognitive behavior by employing cluster-based statistics, which is less conservative than other methods, such as Bonferroni correction, false discovery rate procedure, and extreme statistics. Our method is based on the insight that multiple brain connections, rather than a single connection, are responsible for abnormal behaviors. Given brain connectivity data, we first compute a partial correlation coefficient between every edge and the behavioral measure. Then we group together neighboring connections with strong correlation into clusters and calculate their maximum sizes. This procedure is repeated for randomly permuted assignments of behavioral measures. Significance levels of the identified sub-networks are estimated from the null distribution of the cluster sizes. This method is independent of network construction methods: either structural or functional network can be used in association with any behavioral measures. We further demonstrated the efficacy of our method using patients with subcortical vascular cognitive impairment. We identified sub-networks that are correlated with the disease severity by exploiting diffusion tensor imaging techniques. The identified sub-networks were consistent with the previous clinical findings having valid significance level, while other methods did not assert any significant findings. Public Library of Science 2013-08-19 /pmc/articles/PMC3747142/ /pubmed/23977281 http://dx.doi.org/10.1371/journal.pone.0072332 Text en © 2013 Han et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Han, Cheol E. Yoo, Sang Wook Seo, Sang Won Na, Duk L. Seong, Joon-Kyung Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures |
title | Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures |
title_full | Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures |
title_fullStr | Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures |
title_full_unstemmed | Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures |
title_short | Cluster-Based Statistics for Brain Connectivity in Correlation with Behavioral Measures |
title_sort | cluster-based statistics for brain connectivity in correlation with behavioral measures |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3747142/ https://www.ncbi.nlm.nih.gov/pubmed/23977281 http://dx.doi.org/10.1371/journal.pone.0072332 |
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