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Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene

Single- and low-copy genes are less likely to be subject to concerted evolution. Thus, they are appropriate tools to study the origin and evolution of polyploidy plant taxa. The plastid 3-phosphoglycerate kinase gene (Pgk-1) sequences from 44 accessions of Triticum and Aegilops, representing diploid...

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Autores principales: Chen, Qian, Kang, Hou-Yang, Fan, Xing, Wang, Yi, Sha, Li-Na, Zhang, Hai-Qin, Zhong, Mei-Yu, Xu, Li-Li, Zeng, Jian, Yang, Rui-Wu, Zhang, Li, Ding, Chun-Bang, Zhou, Yong-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3747190/
https://www.ncbi.nlm.nih.gov/pubmed/23990932
http://dx.doi.org/10.1371/journal.pone.0071139
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author Chen, Qian
Kang, Hou-Yang
Fan, Xing
Wang, Yi
Sha, Li-Na
Zhang, Hai-Qin
Zhong, Mei-Yu
Xu, Li-Li
Zeng, Jian
Yang, Rui-Wu
Zhang, Li
Ding, Chun-Bang
Zhou, Yong-Hong
author_facet Chen, Qian
Kang, Hou-Yang
Fan, Xing
Wang, Yi
Sha, Li-Na
Zhang, Hai-Qin
Zhong, Mei-Yu
Xu, Li-Li
Zeng, Jian
Yang, Rui-Wu
Zhang, Li
Ding, Chun-Bang
Zhou, Yong-Hong
author_sort Chen, Qian
collection PubMed
description Single- and low-copy genes are less likely to be subject to concerted evolution. Thus, they are appropriate tools to study the origin and evolution of polyploidy plant taxa. The plastid 3-phosphoglycerate kinase gene (Pgk-1) sequences from 44 accessions of Triticum and Aegilops, representing diploid, tetraploid, and hexaploid wheats, were used to estimate the origin of Triticum petropavlovskyi. Our phylogenetic analysis was carried out on exon+intron, exon and intron sequences, using maximum likelihood, Bayesian inference and haplotype networking. We found the D genome sequences of Pgk-1 genes from T. petropavlovskyi are similar to the D genome orthologs in T. aestivum, while their relationship with Ae. tauschii is more distant. The A genome sequences of T. petropavlovskyi group with those of T. polonicum, but its Pgk-1 B genome sequences to some extent diverge from those of other species of Triticum. Our data do not support for the origin of T. petropavlovskyi either as an independent allopolyploidization event between Ae. tauschii and T. polonicum, or as a monomendelian mutation in T. aestivum. We suggest that T. petropavlovskyi originated via spontaneous introgression from T. polonicum into T. aestivum. The dating of this introgression indicates an age of 0.78 million years; a further mutation event concerning the B genome occurred 0.69 million years ago.
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spelling pubmed-37471902013-08-29 Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene Chen, Qian Kang, Hou-Yang Fan, Xing Wang, Yi Sha, Li-Na Zhang, Hai-Qin Zhong, Mei-Yu Xu, Li-Li Zeng, Jian Yang, Rui-Wu Zhang, Li Ding, Chun-Bang Zhou, Yong-Hong PLoS One Research Article Single- and low-copy genes are less likely to be subject to concerted evolution. Thus, they are appropriate tools to study the origin and evolution of polyploidy plant taxa. The plastid 3-phosphoglycerate kinase gene (Pgk-1) sequences from 44 accessions of Triticum and Aegilops, representing diploid, tetraploid, and hexaploid wheats, were used to estimate the origin of Triticum petropavlovskyi. Our phylogenetic analysis was carried out on exon+intron, exon and intron sequences, using maximum likelihood, Bayesian inference and haplotype networking. We found the D genome sequences of Pgk-1 genes from T. petropavlovskyi are similar to the D genome orthologs in T. aestivum, while their relationship with Ae. tauschii is more distant. The A genome sequences of T. petropavlovskyi group with those of T. polonicum, but its Pgk-1 B genome sequences to some extent diverge from those of other species of Triticum. Our data do not support for the origin of T. petropavlovskyi either as an independent allopolyploidization event between Ae. tauschii and T. polonicum, or as a monomendelian mutation in T. aestivum. We suggest that T. petropavlovskyi originated via spontaneous introgression from T. polonicum into T. aestivum. The dating of this introgression indicates an age of 0.78 million years; a further mutation event concerning the B genome occurred 0.69 million years ago. Public Library of Science 2013-08-19 /pmc/articles/PMC3747190/ /pubmed/23990932 http://dx.doi.org/10.1371/journal.pone.0071139 Text en © 2013 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Chen, Qian
Kang, Hou-Yang
Fan, Xing
Wang, Yi
Sha, Li-Na
Zhang, Hai-Qin
Zhong, Mei-Yu
Xu, Li-Li
Zeng, Jian
Yang, Rui-Wu
Zhang, Li
Ding, Chun-Bang
Zhou, Yong-Hong
Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
title Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
title_full Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
title_fullStr Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
title_full_unstemmed Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
title_short Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
title_sort evolutionary history of triticum petropavlovskyi udacz. et migusch. inferred from the sequences of the 3-phosphoglycerate kinase gene
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3747190/
https://www.ncbi.nlm.nih.gov/pubmed/23990932
http://dx.doi.org/10.1371/journal.pone.0071139
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