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Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene
Single- and low-copy genes are less likely to be subject to concerted evolution. Thus, they are appropriate tools to study the origin and evolution of polyploidy plant taxa. The plastid 3-phosphoglycerate kinase gene (Pgk-1) sequences from 44 accessions of Triticum and Aegilops, representing diploid...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3747190/ https://www.ncbi.nlm.nih.gov/pubmed/23990932 http://dx.doi.org/10.1371/journal.pone.0071139 |
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author | Chen, Qian Kang, Hou-Yang Fan, Xing Wang, Yi Sha, Li-Na Zhang, Hai-Qin Zhong, Mei-Yu Xu, Li-Li Zeng, Jian Yang, Rui-Wu Zhang, Li Ding, Chun-Bang Zhou, Yong-Hong |
author_facet | Chen, Qian Kang, Hou-Yang Fan, Xing Wang, Yi Sha, Li-Na Zhang, Hai-Qin Zhong, Mei-Yu Xu, Li-Li Zeng, Jian Yang, Rui-Wu Zhang, Li Ding, Chun-Bang Zhou, Yong-Hong |
author_sort | Chen, Qian |
collection | PubMed |
description | Single- and low-copy genes are less likely to be subject to concerted evolution. Thus, they are appropriate tools to study the origin and evolution of polyploidy plant taxa. The plastid 3-phosphoglycerate kinase gene (Pgk-1) sequences from 44 accessions of Triticum and Aegilops, representing diploid, tetraploid, and hexaploid wheats, were used to estimate the origin of Triticum petropavlovskyi. Our phylogenetic analysis was carried out on exon+intron, exon and intron sequences, using maximum likelihood, Bayesian inference and haplotype networking. We found the D genome sequences of Pgk-1 genes from T. petropavlovskyi are similar to the D genome orthologs in T. aestivum, while their relationship with Ae. tauschii is more distant. The A genome sequences of T. petropavlovskyi group with those of T. polonicum, but its Pgk-1 B genome sequences to some extent diverge from those of other species of Triticum. Our data do not support for the origin of T. petropavlovskyi either as an independent allopolyploidization event between Ae. tauschii and T. polonicum, or as a monomendelian mutation in T. aestivum. We suggest that T. petropavlovskyi originated via spontaneous introgression from T. polonicum into T. aestivum. The dating of this introgression indicates an age of 0.78 million years; a further mutation event concerning the B genome occurred 0.69 million years ago. |
format | Online Article Text |
id | pubmed-3747190 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-37471902013-08-29 Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene Chen, Qian Kang, Hou-Yang Fan, Xing Wang, Yi Sha, Li-Na Zhang, Hai-Qin Zhong, Mei-Yu Xu, Li-Li Zeng, Jian Yang, Rui-Wu Zhang, Li Ding, Chun-Bang Zhou, Yong-Hong PLoS One Research Article Single- and low-copy genes are less likely to be subject to concerted evolution. Thus, they are appropriate tools to study the origin and evolution of polyploidy plant taxa. The plastid 3-phosphoglycerate kinase gene (Pgk-1) sequences from 44 accessions of Triticum and Aegilops, representing diploid, tetraploid, and hexaploid wheats, were used to estimate the origin of Triticum petropavlovskyi. Our phylogenetic analysis was carried out on exon+intron, exon and intron sequences, using maximum likelihood, Bayesian inference and haplotype networking. We found the D genome sequences of Pgk-1 genes from T. petropavlovskyi are similar to the D genome orthologs in T. aestivum, while their relationship with Ae. tauschii is more distant. The A genome sequences of T. petropavlovskyi group with those of T. polonicum, but its Pgk-1 B genome sequences to some extent diverge from those of other species of Triticum. Our data do not support for the origin of T. petropavlovskyi either as an independent allopolyploidization event between Ae. tauschii and T. polonicum, or as a monomendelian mutation in T. aestivum. We suggest that T. petropavlovskyi originated via spontaneous introgression from T. polonicum into T. aestivum. The dating of this introgression indicates an age of 0.78 million years; a further mutation event concerning the B genome occurred 0.69 million years ago. Public Library of Science 2013-08-19 /pmc/articles/PMC3747190/ /pubmed/23990932 http://dx.doi.org/10.1371/journal.pone.0071139 Text en © 2013 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Chen, Qian Kang, Hou-Yang Fan, Xing Wang, Yi Sha, Li-Na Zhang, Hai-Qin Zhong, Mei-Yu Xu, Li-Li Zeng, Jian Yang, Rui-Wu Zhang, Li Ding, Chun-Bang Zhou, Yong-Hong Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene |
title | Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene |
title_full | Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene |
title_fullStr | Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene |
title_full_unstemmed | Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene |
title_short | Evolutionary History of Triticum petropavlovskyi Udacz. et Migusch. Inferred from the Sequences of the 3-Phosphoglycerate Kinase Gene |
title_sort | evolutionary history of triticum petropavlovskyi udacz. et migusch. inferred from the sequences of the 3-phosphoglycerate kinase gene |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3747190/ https://www.ncbi.nlm.nih.gov/pubmed/23990932 http://dx.doi.org/10.1371/journal.pone.0071139 |
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